HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.3 nTPM
HPA:51.3 nTPM
GTEx:44.8 nTPM
FANTOM5:162.6 Scaled Tags Per Million
Pig:151.1 nTPM
Mouse:182.4 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029632Antibody HPA029633Antibody CAB009745
Glial cells LowNot detectedNot detected
Neuronal cells HighNot detectedLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.3
Sample id Sample description nTPM
Hippocampus
nTPM: 22.6
1898 Male, age 80, left hemisphere 49.5
1855 Male, age 76, left hemisphere 34.7
2621 Female, age 67, right hemisphere 24.5
2148 Female, age 91, left hemisphere 22.7
1911 Female, age 85, right hemisphere 4.4
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 26.2
1927 Female, age 91, both hemispheres 46.4
2010 Male, age 76, both hemispheres 29.0
2528 Male, age 74, both hemispheres 23.8
2531 Female, age 67, both hemispheres 22.5
2246 Female, age 85, both hemispheres 21.2
2530 Female, age 94, left hemisphere 14.0
Entorhinal gyrus
nTPM: 28.5
2764 Male, age 80, right hemisphere 40.3
2613 Female, age 94, left hemisphere 39.2
1938 Female, age 85, left hemisphere 36.2
1787 Male, age 76, left hemisphere 26.4
2686 Male, age 75, right hemisphere 24.8
2117 Female, age 91, right hemisphere 4.3
Hippocampus, CA1
nTPM: 30.3
2749 Male, age 80, left hemisphere 52.7
1873 Female, age 85, both hemispheres 38.3
2045 Male, age 76, both hemispheres 29.1
2527 Male, age 74, both hemispheres 23.0
2082 Female, age 91, right hemisphere 8.3
Hippocampus, CA2
nTPM: 24.1
1892 Male, age 76, both hemispheres 51.4
1963 Male, age 80, left hemisphere 44.5
2437 Female, age 94, left hemisphere 15.1
2249 Male, age 74, both hemispheres 13.3
1940 Female, age 85, left hemisphere 12.5
2113 Female, age 91, right hemisphere 7.8
Hippocampus, CA3
nTPM: 22.6
2620 Female, age 94, left hemisphere 43.4
2861 Female, age 67, both hemispheres 24.7
2137 Male, age 80, left hemisphere 19.3
2436 Male, age 74, both hemispheres 19.3
1867 Male, age 76, both hemispheres 16.8
1891 Female, age 85, both hemispheres 11.9
Parahippocampal cortex
nTPM: 32.8
1850 Male, age 80, both hemispheres 55.8
2693 Female, age 94, both hemispheres 52.5
1933 Female, age 85, both hemispheres 37.5
1990 Female, age 91, right hemisphere 36.4
2245 Female, age 91, both hemispheres 33.4
2250 Female, age 67, right hemisphere 33.3
2532 Female, age 72, left hemisphere 27.6
2622 Female, age 67, right hemisphere 23.4
2018 Male, age 76, both hemispheres 15.6
2692 Male, age 74, both hemispheres 12.6
Perirhinal gyrus
nTPM: 51.3
1847 Female, age 91, left hemisphere 70.6
1794 Male, age 80, right hemisphere 56.8
2521 Female, age 94, right hemisphere 46.0
1841 Female, age 85, right hemisphere 43.7
2848 Male, age 76, right hemisphere 39.2
Subiculum
nTPM: 12.4
1977 Female, age 85, both hemispheres 27.0
2619 Male, age 74, both hemispheres 15.0
1901 Male, age 80, both hemispheres 12.6
2729 Female, age 91, right hemisphere 11.8
2438 Female, age 94, left hemisphere 7.8
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.8
Samples: 197

Max nTPM: 165.4
Min nTPM: 2.8
Std nTPM: 30.8
Median nTPM: 37.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 165.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 125.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 122.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 121.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 121.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 116.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 113.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 109.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 108.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 105.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 104.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 162.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 162.6
FF:10169-103B7 60 years, female 220.7
FF:10153-102I9 76 years, female 104.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 151.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 144.9
Samples: 4

Max nTPM: 186.0
Min nTPM: 100.4
Sample A Female 186.0
Sample B Female 163.7
Sample C Male 100.4
Sample D Male 129.6
Entorhinal cortex
nTPM: 146.0
Samples: 4

Max nTPM: 160.8
Min nTPM: 134.3
Sample A Female 160.8
Sample B Female 145.4
Sample C Male 143.6
Sample D Male 134.3
Subiculum
nTPM: 129.6
Samples: 4

Max nTPM: 166.8
Min nTPM: 110.6
Sample A Female 166.8
Sample B Female 110.6
Sample C Male 120.1
Sample D Male 120.8
Ventral hippocampus
nTPM: 151.1
Samples: 4

Max nTPM: 185.7
Min nTPM: 105.9
Sample A Female 185.7
Sample B Female 105.9
Sample C Male 182.8
Sample D Male 130.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 182.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 182.4
Samples: 4

Max nTPM: 220.6
Min nTPM: 165.3
Sample A Male 165.3
Sample B Male 175.4
Sample C Female 168.2
Sample D Female 220.6
Hippocampal formation
nTPM: 174.7
Samples: 4

Max nTPM: 197.0
Min nTPM: 153.0
Sample A Male 153.0
Sample B Male 187.9
Sample C Female 197.0
Sample D Female 161.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
984 Antisense, RP_040227_01_05, Mouse strain C57BL/6J (56 days, male) 9.8
985 Antisense, RP_040227_01_05, Mouse strain C57BL/6J (56 days, male) 5.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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