We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
FAM107B
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • FAM107B
TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:95.5 nTPM
HPA:95.5 nTPM
GTEx:141.5 nTPM
FANTOM5:346.7 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 95.5
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 85.2
1981 Female, age 72, midline 89.9
2048 Male, age 55, midline 89.4
2194 Female, age 79, both hemispheres 89.3
2816 Male, age 47, midline 85.4
2565 Male, age 75, midline 72.1
Cervical spinal cord, dorsal horn
nTPM: 95.5
2296 Male, age 66, both hemispheres 133.7
2173 Female, age 72, unknown 125.5
2069 Male, age 47, both hemispheres 91.0
1877 Male, age 55, unknown 86.0
2297 Male, age 75, both hemispheres 71.1
2721 Male, age 90, both hemispheres 65.5
Cervical spinal cord, ventral horn
nTPM: 93.5
2068 Male, age 55, unknown 104.1
2820 Female, age 79, both hemispheres 99.1
2809 Male, age 90, both hemispheres 94.4
2480 Male, age 75, both hemispheres 90.3
2098 Female, age 72, unknown 87.3
2295 Male, age 66, both hemispheres 85.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 141.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 141.5
Samples: 159

Max nTPM: 354.6
Min nTPM: 29.4
Std nTPM: 52.0
Median nTPM: 136.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 354.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 311.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 306.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 291.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 252.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 249.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 247.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 244.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 235.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 230.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 219.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 215.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 215.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 208.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 203.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 199.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 199.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 196.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 193.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 193.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 191.9
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 191.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 190.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 189.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 187.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 182.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 181.6
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 179.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 178.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 178.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 176.2
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 171.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 171.2
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 170.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 170.5
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 170.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 169.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 168.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 168.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 167.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 166.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 166.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 165.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 165.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 163.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 163.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 163.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 163.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 163.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 162.0
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 161.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 161.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 160.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 159.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 156.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 154.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 153.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 153.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 153.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 153.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 153.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 152.3
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 151.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 148.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 148.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 147.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 145.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 144.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 144.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 144.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 141.1
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 140.7
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 139.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 138.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 138.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 138.1
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 138.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 137.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 137.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 136.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 136.5
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 135.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 135.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 133.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 132.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 131.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 131.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 131.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 130.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 129.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 127.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 127.6
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 127.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 125.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 125.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 124.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 124.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 123.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 123.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 123.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 120.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 120.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 120.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 119.3
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 119.2
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 117.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 117.4
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 116.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 116.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 116.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 116.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 115.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 114.7
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 114.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 113.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 113.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 112.1
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 110.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 108.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 107.3
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 106.4
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 105.2
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 104.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 104.6
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 103.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 101.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 99.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 94.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 94.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 91.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 91.0
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 91.0
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 91.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 90.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 90.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 90.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 88.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 87.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 87.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 86.4
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 85.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 85.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 84.6
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 83.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 82.5
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 81.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 80.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 79.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 77.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 76.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 73.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 65.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 61.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 56.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 56.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 55.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 52.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 36.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 29.4
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 346.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 346.7
FF:10181-103D1 60 years, female 443.0
FF:10159-103A6 76 years, female 250.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.