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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:332.3 nTPM
GTEx:332.3 nTPM
FANTOM5:95.6 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA040304Antibody HPA057159Antibody CAB005875
Squamous epithelial cells MediumLowHigh

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 332.3
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 332.3
Samples: 156

Max nTPM: 612.3
Min nTPM: 183.9
Std nTPM: 73.6
Median nTPM: 327.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 612.3
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 602.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 573.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 544.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 475.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 461.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 452.8
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 444.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 439.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 439.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 437.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 430.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 427.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 427.6
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 427.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 424.0
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 417.5
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 415.4
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 415.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 414.6
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 412.2
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 412.2
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 410.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 406.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 401.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 401.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 400.0
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 398.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 391.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 390.8
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 390.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 388.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 383.2
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 383.0
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 382.4
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 381.9
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 379.0
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 378.0
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 376.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 374.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 374.5
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 369.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 367.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 367.6
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 365.6
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 365.6
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 362.7
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 362.3
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 359.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 359.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 359.2
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 357.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 356.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 353.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 352.2
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 349.9
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 349.7
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 349.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 348.8
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 346.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 343.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 342.8
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 340.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 340.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 339.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 337.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 337.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 337.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 336.5
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 336.1
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 335.8
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 334.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 331.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 330.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 330.6
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 329.2
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 328.8
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 327.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 327.6
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 327.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 318.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 317.5
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 317.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 316.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 315.2
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 314.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 314.1
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 313.6
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 313.2
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 313.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 312.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 311.0
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 310.7
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 310.7
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 309.5
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 306.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 306.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 303.1
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 299.9
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 299.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 298.7
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 298.6
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 292.8
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 291.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 291.2
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 289.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 287.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 286.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 286.2
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 284.1
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 283.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 282.2
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 281.8
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 281.2
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 280.7
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 280.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 279.9
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 278.0
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 275.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 275.8
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 274.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 274.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 273.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 272.4
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 271.3
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 271.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 270.9
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 270.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 269.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 268.7
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 264.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 264.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 260.6
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 257.3
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 256.6
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 254.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 252.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 248.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 247.9
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 247.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 243.3
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 242.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 242.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 239.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 238.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 237.5
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 235.7
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 231.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 230.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 229.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 228.3
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 218.9
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 218.0
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 213.5
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 208.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 183.9
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 95.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 95.6
FF:10204-103F6 68 years, female 95.6

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.