HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:76.8 nTPM
HPA:76.8 nTPM
GTEx:101.6 nTPM
FANTOM5:53.3 Scaled Tags Per Million
Pig:29.4 nTPM
Mouse:29.9 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056557Antibody CAB033426
Glial cells MediumLow
Neuronal cells Not detectedHigh



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.8
Sample id Sample description nTPM
Hippocampus
nTPM: 69.9
1911 Female, age 85, right hemisphere 76.2
1898 Male, age 80, left hemisphere 71.6
2621 Female, age 67, right hemisphere 71.3
2529 Female, age 94, left hemisphere 67.9
1855 Male, age 76, left hemisphere 66.8
2148 Female, age 91, left hemisphere 65.8
Dentate gyrus
nTPM: 71.1
2530 Female, age 94, left hemisphere 87.9
2528 Male, age 74, both hemispheres 74.7
2010 Male, age 76, both hemispheres 70.3
2246 Female, age 85, both hemispheres 66.3
2531 Female, age 67, both hemispheres 65.9
1927 Female, age 91, both hemispheres 61.3
Entorhinal gyrus
nTPM: 70.2
2117 Female, age 91, right hemisphere 84.0
2764 Male, age 80, right hemisphere 74.9
1938 Female, age 85, left hemisphere 67.2
2613 Female, age 94, left hemisphere 65.5
1787 Male, age 76, left hemisphere 65.3
2686 Male, age 75, right hemisphere 64.6
Hippocampus, CA1
nTPM: 65.3
2527 Male, age 74, both hemispheres 70.3
1873 Female, age 85, both hemispheres 66.5
2082 Female, age 91, right hemisphere 65.9
2749 Male, age 80, left hemisphere 64.7
2045 Male, age 76, both hemispheres 59.1
Hippocampus, CA2
nTPM: 70.8
2249 Male, age 74, both hemispheres 79.2
1963 Male, age 80, left hemisphere 73.4
2437 Female, age 94, left hemisphere 73.3
1940 Female, age 85, left hemisphere 68.8
2113 Female, age 91, right hemisphere 66.6
1892 Male, age 76, both hemispheres 63.6
Hippocampus, CA3
nTPM: 66.5
1891 Female, age 85, both hemispheres 78.9
1867 Male, age 76, both hemispheres 69.1
2436 Male, age 74, both hemispheres 67.7
2620 Female, age 94, left hemisphere 63.9
2137 Male, age 80, left hemisphere 61.1
2861 Female, age 67, both hemispheres 58.4
Parahippocampal cortex
nTPM: 66.4
2532 Female, age 72, left hemisphere 75.1
2692 Male, age 74, both hemispheres 73.6
1990 Female, age 91, right hemisphere 69.7
2018 Male, age 76, both hemispheres 66.8
1850 Male, age 80, both hemispheres 66.0
1933 Female, age 85, both hemispheres 65.8
2245 Female, age 91, both hemispheres 65.4
2693 Female, age 94, both hemispheres 63.2
2250 Female, age 67, right hemisphere 60.5
2622 Female, age 67, right hemisphere 57.9
Perirhinal gyrus
nTPM: 62.2
1794 Male, age 80, right hemisphere 63.7
2521 Female, age 94, right hemisphere 63.7
2848 Male, age 76, right hemisphere 62.4
1841 Female, age 85, right hemisphere 61.0
1847 Female, age 91, left hemisphere 60.1
Subiculum
nTPM: 76.8
2042 Male, age 76, both hemispheres 88.4
1901 Male, age 80, both hemispheres 85.2
1977 Female, age 85, both hemispheres 76.5
2619 Male, age 74, both hemispheres 73.2
2438 Female, age 94, left hemisphere 69.6
2729 Female, age 91, right hemisphere 67.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 101.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.6
Samples: 197

Max nTPM: 397.9
Min nTPM: 14.1
Std nTPM: 67.2
Median nTPM: 84.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 397.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 365.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 342.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 337.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 265.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 259.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 236.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 227.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 222.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 221.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 218.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.3
FF:10153-102I9 76 years, female 60.7
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.4
Samples: 4

Max nTPM: 42.5
Min nTPM: 10.3
Sample A Female 42.5
Sample B Female 22.1
Sample C Male 42.5
Sample D Male 10.3
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.0
Sample A Female 10.6
Sample B Female 14.4
Sample C Male 10.0
Sample D Male 11.2
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 13.4
Min nTPM: 9.4
Sample A Female 12.1
Sample B Female 13.4
Sample C Male 9.4
Sample D Male 13.2
Ventral hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 27.4
Min nTPM: 9.2
Sample A Female 21.9
Sample B Female 9.2
Sample C Male 21.3
Sample D Male 27.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 21.6
Min nTPM: 16.4
Sample A Male 21.6
Sample B Male 18.0
Sample C Female 21.6
Sample D Female 16.4
Hippocampal formation
nTPM: 30.0
Samples: 4

Max nTPM: 42.0
Min nTPM: 19.4
Sample A Male 19.4
Sample B Male 26.7
Sample C Female 42.0
Sample D Female 31.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69671989 Antisense, RP_050428_02_G06, Mouse strain C57BL/6J (56 days, male) 0.9
74882527 Antisense, RP_060315_04_E12, Mouse strain C57BL/6J (56 days, male) 0.6

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