HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.7 nTPM
HPA:11.7 nTPM
GTEx:11.7 nTPM
FANTOM5:27.3 Scaled Tags Per Million
Pig:25.9 nTPM
Mouse:4.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044653Antibody CAB004079
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.7
Sample id Sample description nTPM
Hippocampus
nTPM: 11.7
1855 Male, age 76, left hemisphere 15.3
2621 Female, age 67, right hemisphere 13.9
2529 Female, age 94, left hemisphere 11.8
1898 Male, age 80, left hemisphere 10.2
2148 Female, age 91, left hemisphere 9.8
1911 Female, age 85, right hemisphere 9.1
Dentate gyrus
nTPM: 9.1
2530 Female, age 94, left hemisphere 11.9
2010 Male, age 76, both hemispheres 9.5
2531 Female, age 67, both hemispheres 9.4
2246 Female, age 85, both hemispheres 9.0
2528 Male, age 74, both hemispheres 7.4
1927 Female, age 91, both hemispheres 7.3
Entorhinal gyrus
nTPM: 8.8
2117 Female, age 91, right hemisphere 11.8
1787 Male, age 76, left hemisphere 10.5
2613 Female, age 94, left hemisphere 8.7
2764 Male, age 80, right hemisphere 7.7
2686 Male, age 75, right hemisphere 7.5
1938 Female, age 85, left hemisphere 6.9
Hippocampus, CA1
nTPM: 7.9
2045 Male, age 76, both hemispheres 10.1
2082 Female, age 91, right hemisphere 8.7
1873 Female, age 85, both hemispheres 7.6
2527 Male, age 74, both hemispheres 7.2
2749 Male, age 80, left hemisphere 6.2
Hippocampus, CA2
nTPM: 10.5
1940 Female, age 85, left hemisphere 17.3
2437 Female, age 94, left hemisphere 12.0
2113 Female, age 91, right hemisphere 10.4
1892 Male, age 76, both hemispheres 9.4
1963 Male, age 80, left hemisphere 7.8
2249 Male, age 74, both hemispheres 6.4
Hippocampus, CA3
nTPM: 7.7
1867 Male, age 76, both hemispheres 11.4
2861 Female, age 67, both hemispheres 11.0
1891 Female, age 85, both hemispheres 7.8
2436 Male, age 74, both hemispheres 6.2
2137 Male, age 80, left hemisphere 5.9
2620 Female, age 94, left hemisphere 3.9
Parahippocampal cortex
nTPM: 8.7
2250 Female, age 67, right hemisphere 15.4
2018 Male, age 76, both hemispheres 12.0
2622 Female, age 67, right hemisphere 9.7
2245 Female, age 91, both hemispheres 9.2
1990 Female, age 91, right hemisphere 7.8
2692 Male, age 74, both hemispheres 7.7
2693 Female, age 94, both hemispheres 7.2
2532 Female, age 72, left hemisphere 7.1
1933 Female, age 85, both hemispheres 5.9
1850 Male, age 80, both hemispheres 5.3
Perirhinal gyrus
nTPM: 6.9
2521 Female, age 94, right hemisphere 9.7
2848 Male, age 76, right hemisphere 7.6
1794 Male, age 80, right hemisphere 6.2
1847 Female, age 91, left hemisphere 5.7
1841 Female, age 85, right hemisphere 5.5
Subiculum
nTPM: 10.4
2042 Male, age 76, both hemispheres 15.6
2729 Female, age 91, right hemisphere 11.7
2438 Female, age 94, left hemisphere 10.2
2619 Male, age 74, both hemispheres 10.0
1901 Male, age 80, both hemispheres 9.4
1977 Female, age 85, both hemispheres 5.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.7
Samples: 197

Max nTPM: 99.8
Min nTPM: 1.5
Std nTPM: 10.6
Median nTPM: 8.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 99.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 57.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 47.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 47.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 37.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 35.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 34.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 33.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 32.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 31.7
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 30.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.3
FF:10153-102I9 76 years, female 33.8
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 31.4
Min nTPM: 19.7
Sample A Female 31.4
Sample B Female 21.3
Sample C Male 31.1
Sample D Male 19.7
Entorhinal cortex
nTPM: 19.3
Samples: 4

Max nTPM: 20.4
Min nTPM: 17.6
Sample A Female 20.4
Sample B Female 18.9
Sample C Male 20.3
Sample D Male 17.6
Subiculum
nTPM: 24.7
Samples: 4

Max nTPM: 33.0
Min nTPM: 21.4
Sample A Female 33.0
Sample B Female 22.8
Sample C Male 21.4
Sample D Male 21.5
Ventral hippocampus
nTPM: 24.1
Samples: 4

Max nTPM: 28.2
Min nTPM: 19.1
Sample A Female 26.4
Sample B Female 19.1
Sample C Male 28.2
Sample D Male 22.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.0
Sample A Male 4.1
Sample B Male 5.3
Sample C Female 5.3
Sample D Female 3.0
Hippocampal formation
nTPM: 4.7
Samples: 4

Max nTPM: 6.9
Min nTPM: 3.3
Sample A Male 4.9
Sample B Male 3.3
Sample C Female 3.8
Sample D Female 6.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
227535 Antisense, RP_040526_02_B02, Mouse strain C57BL/6J (56 days, male) 0.1
68203476 Antisense, RP_041208_01_B08, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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