HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:11.9 nTPM
HPA:11.9 nTPM
GTEx:8.8 nTPM
FANTOM5:19.4 Scaled Tags Per Million
Pig:23.5 nTPM
Mouse:35.9 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.9
Sample id Sample description nTPM
Hippocampus
nTPM: 11.7
1855 Male, age 76, left hemisphere 18.7
2148 Female, age 91, left hemisphere 13.4
1898 Male, age 80, left hemisphere 13.0
2621 Female, age 67, right hemisphere 10.4
1911 Female, age 85, right hemisphere 7.3
2529 Female, age 94, left hemisphere 7.2
Dentate gyrus
nTPM: 11.9
1927 Female, age 91, both hemispheres 14.4
2010 Male, age 76, both hemispheres 14.1
2530 Female, age 94, left hemisphere 12.3
2531 Female, age 67, both hemispheres 12.3
2528 Male, age 74, both hemispheres 9.4
2246 Female, age 85, both hemispheres 8.6
Entorhinal gyrus
nTPM: 6.9
2613 Female, age 94, left hemisphere 8.8
2764 Male, age 80, right hemisphere 7.8
1787 Male, age 76, left hemisphere 7.6
1938 Female, age 85, left hemisphere 6.7
2686 Male, age 75, right hemisphere 6.2
2117 Female, age 91, right hemisphere 4.1
Hippocampus, CA1
nTPM: 11.9
2045 Male, age 76, both hemispheres 25.6
1873 Female, age 85, both hemispheres 13.6
2749 Male, age 80, left hemisphere 9.2
2527 Male, age 74, both hemispheres 6.9
2082 Female, age 91, right hemisphere 4.2
Hippocampus, CA2
nTPM: 9.6
1963 Male, age 80, left hemisphere 16.2
1892 Male, age 76, both hemispheres 15.2
2437 Female, age 94, left hemisphere 10.4
2249 Male, age 74, both hemispheres 6.0
2113 Female, age 91, right hemisphere 4.9
1940 Female, age 85, left hemisphere 4.6
Hippocampus, CA3
nTPM: 9.8
2620 Female, age 94, left hemisphere 20.6
2861 Female, age 67, both hemispheres 12.3
1867 Male, age 76, both hemispheres 7.8
2137 Male, age 80, left hemisphere 6.6
1891 Female, age 85, both hemispheres 6.0
2436 Male, age 74, both hemispheres 5.6
Parahippocampal cortex
nTPM: 7.2
2622 Female, age 67, right hemisphere 8.8
2245 Female, age 91, both hemispheres 8.6
2693 Female, age 94, both hemispheres 8.3
2250 Female, age 67, right hemisphere 7.6
2692 Male, age 74, both hemispheres 7.6
2532 Female, age 72, left hemisphere 7.1
1850 Male, age 80, both hemispheres 6.9
2018 Male, age 76, both hemispheres 6.2
1990 Female, age 91, right hemisphere 5.7
1933 Female, age 85, both hemispheres 5.5
Perirhinal gyrus
nTPM: 7.9
1841 Female, age 85, right hemisphere 8.4
2848 Male, age 76, right hemisphere 8.3
1847 Female, age 91, left hemisphere 7.9
2521 Female, age 94, right hemisphere 7.9
1794 Male, age 80, right hemisphere 7.1
Subiculum
nTPM: 6.8
2438 Female, age 94, left hemisphere 9.4
2729 Female, age 91, right hemisphere 9.1
2619 Male, age 74, both hemispheres 8.0
1977 Female, age 85, both hemispheres 5.9
1901 Male, age 80, both hemispheres 4.5
2042 Male, age 76, both hemispheres 4.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.8
Samples: 197

Max nTPM: 34.7
Min nTPM: 1.6
Std nTPM: 5.1
Median nTPM: 7.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 34.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 27.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 25.0
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 24.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 23.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 21.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 21.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 21.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 20.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 20.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 19.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.4
FF:10169-103B7 60 years, female 28.2
FF:10153-102I9 76 years, female 10.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 35.8
Min nTPM: 11.0
Sample A Female 22.3
Sample B Female 25.1
Sample C Male 11.0
Sample D Male 35.8
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 11.5
Min nTPM: 9.7
Sample A Female 11.2
Sample B Female 9.9
Sample C Male 11.5
Sample D Male 9.7
Subiculum
nTPM: 13.9
Samples: 4

Max nTPM: 16.1
Min nTPM: 12.7
Sample A Female 16.1
Sample B Female 13.0
Sample C Male 12.7
Sample D Male 13.6
Ventral hippocampus
nTPM: 14.7
Samples: 4

Max nTPM: 16.9
Min nTPM: 12.9
Sample A Female 16.9
Sample B Female 14.8
Sample C Male 14.3
Sample D Male 12.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.5
Samples: 4

Max nTPM: 29.1
Min nTPM: 25.6
Sample A Male 25.6
Sample B Male 28.4
Sample C Female 27.0
Sample D Female 29.1
Hippocampal formation
nTPM: 35.9
Samples: 4

Max nTPM: 41.5
Min nTPM: 31.5
Sample A Male 35.6
Sample B Male 35.0
Sample C Female 41.5
Sample D Female 31.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
73497744 Antisense, RP_051121_01_F02, Mouse strain C57BL/6J (56 days, male) 0.6

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