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LRRC40
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:7.2 nTPM
FANTOM5:25.9 Scaled Tags Per Million
Pig:5.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA026564
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 7.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 7.2
Samples: 246

Max nTPM: 19.2
Min nTPM: 2.5
Std nTPM: 1.9
Median nTPM: 7.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 19.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 14.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 12.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 12.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 11.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 11.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 11.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 11.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 11.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 10.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 10.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 10.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 10.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 10.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 10.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 10.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 10.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 9.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 9.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 9.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 9.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 9.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 9.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 9.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 9.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 9.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 9.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 9.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 9.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 9.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 9.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 9.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 9.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 9.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 9.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 9.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 9.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 8.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 8.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 8.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 8.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 8.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 8.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 8.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 8.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 8.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 8.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 8.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 8.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 8.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 8.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 8.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 8.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 8.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 8.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 8.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 8.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 8.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 8.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 8.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 8.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 8.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 8.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 8.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 8.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 8.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 8.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 8.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 8.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 8.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 7.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 7.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 7.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 7.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 7.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 7.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 7.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 7.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 7.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 7.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 7.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 7.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 7.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 7.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 7.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 7.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 7.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 7.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 7.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 7.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 7.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 7.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 7.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 7.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 7.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 7.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 7.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 7.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 7.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 7.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 7.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 7.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 7.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 7.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 7.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 7.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 7.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 7.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 7.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 7.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 7.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 7.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 7.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 7.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 7.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 7.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 7.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 7.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 7.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 7.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 7.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 7.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 7.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 7.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 7.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 7.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 7.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 7.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 7.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 6.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 6.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 6.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 6.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 6.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 6.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 6.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 6.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 6.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 6.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 6.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 6.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 6.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 6.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 6.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 6.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 6.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 6.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 6.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 6.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 6.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 6.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 6.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 6.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 6.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 6.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 6.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 6.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 6.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 6.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 6.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 6.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 6.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 6.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 6.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 6.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 6.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 6.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 6.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 6.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 6.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 6.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 6.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 6.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 6.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 6.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 6.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 6.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 6.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 6.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 5.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 5.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 5.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 5.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 5.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 5.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 5.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 5.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 5.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 5.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 5.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 5.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 5.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 5.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 5.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 5.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 5.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 5.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 5.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 5.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 5.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 5.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 5.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 5.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 5.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 5.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 5.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 5.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 5.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 5.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 5.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 5.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 5.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 5.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 5.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 5.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 5.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 5.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 5.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 5.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 5.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 5.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 4.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 4.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 4.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 4.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 4.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 4.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 4.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 4.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 4.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 4.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 4.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 4.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 4.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 4.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 4.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 4.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 4.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 3.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 3.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 3.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 3.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 3.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 2.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 25.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 25.9
FF:10164-103B2 76 years, female 25.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 5.0
Pig sample Sample description nTPM
Caudate
nTPM: 5.0
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.3
Sample A Female 5.5
Sample B Female 4.3
Sample C Male 4.3
Sample D Male 5.8

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