COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:25.8 nTPM
HPA:8.5 nTPM
GTEx:25.8 nTPM
FANTOM5:80.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA001648Antibody HPA005631Antibody HPA059583
Endothelial cells MediumLowNot detected
Glandular cells MediumLowMedium
Peripheral nerve/ganglion MediumNot detected-




COLON - HPA RNA-seqi
Average nTPM 8.5
overview
Male, age 54 		Colon sample 67
nTPM: 17.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 0
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 16
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 16.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 0
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 0
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 18.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 0
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 25.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 17
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 0
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 0
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 0
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 25.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 25.8
Samples: 373

Max nTPM: 112.5
Min nTPM: 0.0
Std nTPM: 21.5
Median nTPM: 31.0
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 112.5
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 82.5
GTEX-15RIE-2026-SM-7KFRW 60-69 years, male 75.2
GTEX-144GM-1126-SM-79OJK 20-29 years, male 68.7
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 65.5
GTEX-1GL5R-1726-SM-9KNUX 50-59 years, male 64.9
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 64.1
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 63.4
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 62.1
GTEX-1JK1U-1426-SM-CNPOW 60-69 years, male 61.7
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 61.4
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Colon - Transverse
Average nTPM: 19.0
Samples: 406

Max nTPM: 90.0
Min nTPM: 0.0
Std nTPM: 17.2
Median nTPM: 19.2
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 90.0
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 70.8
GTEX-1RAZQ-2126-SM-DTX9V 30-39 years, male 67.5
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 62.8
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 62.6
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 58.5
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 56.1
GTEX-1MUQO-2626-SM-EWRO3 60-69 years, male 56.0
GTEX-1LBAC-1626-SM-CXZKV 20-29 years, male 55.2
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 54.6
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 54.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 80.2
FF:10014-101C5 62,83,84 years, mixed 80.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.