HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:60.4 nTPM
HPA:60.4 nTPM
GTEx:54.5 nTPM
FANTOM5:137.0 Scaled Tags Per Million
Pig:70.5 nTPM
Mouse:132.7 nTPM
Allen mouse:15.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018257
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.4
Sample id Sample description nTPM
Hippocampus
nTPM: 35.8
1898 Male, age 80, left hemisphere 60.7
1855 Male, age 76, left hemisphere 47.1
2148 Female, age 91, left hemisphere 35.8
2621 Female, age 67, right hemisphere 30.7
1911 Female, age 85, right hemisphere 24.8
2529 Female, age 94, left hemisphere 15.5
Dentate gyrus
nTPM: 48.9
2010 Male, age 76, both hemispheres 68.0
2528 Male, age 74, both hemispheres 55.4
2246 Female, age 85, both hemispheres 51.9
1927 Female, age 91, both hemispheres 50.8
2530 Female, age 94, left hemisphere 37.2
2531 Female, age 67, both hemispheres 30.3
Entorhinal gyrus
nTPM: 36.4
2764 Male, age 80, right hemisphere 56.2
2613 Female, age 94, left hemisphere 54.5
1938 Female, age 85, left hemisphere 44.3
1787 Male, age 76, left hemisphere 33.3
2686 Male, age 75, right hemisphere 20.0
2117 Female, age 91, right hemisphere 10.0
Hippocampus, CA1
nTPM: 60.4
2749 Male, age 80, left hemisphere 85.5
2527 Male, age 74, both hemispheres 66.2
1873 Female, age 85, both hemispheres 66.1
2045 Male, age 76, both hemispheres 45.7
2082 Female, age 91, right hemisphere 38.5
Hippocampus, CA2
nTPM: 54.5
2249 Male, age 74, both hemispheres 67.1
1892 Male, age 76, both hemispheres 66.4
1963 Male, age 80, left hemisphere 61.1
1940 Female, age 85, left hemisphere 58.3
2437 Female, age 94, left hemisphere 47.7
2113 Female, age 91, right hemisphere 26.2
Hippocampus, CA3
nTPM: 56.2
2436 Male, age 74, both hemispheres 109.2
2137 Male, age 80, left hemisphere 61.9
1867 Male, age 76, both hemispheres 57.0
2620 Female, age 94, left hemisphere 39.4
1891 Female, age 85, both hemispheres 38.2
2861 Female, age 67, both hemispheres 31.2
Parahippocampal cortex
nTPM: 36.8
1850 Male, age 80, both hemispheres 54.9
1933 Female, age 85, both hemispheres 53.1
2018 Male, age 76, both hemispheres 45.0
2693 Female, age 94, both hemispheres 38.0
2692 Male, age 74, both hemispheres 33.4
1990 Female, age 91, right hemisphere 30.5
2532 Female, age 72, left hemisphere 30.5
2250 Female, age 67, right hemisphere 28.7
2622 Female, age 67, right hemisphere 27.8
2245 Female, age 91, both hemispheres 25.8
Perirhinal gyrus
nTPM: 45.0
1847 Female, age 91, left hemisphere 63.0
1841 Female, age 85, right hemisphere 53.6
2521 Female, age 94, right hemisphere 53.0
1794 Male, age 80, right hemisphere 40.5
2848 Male, age 76, right hemisphere 14.7
Subiculum
nTPM: 34.7
1977 Female, age 85, both hemispheres 48.3
1901 Male, age 80, both hemispheres 38.8
2619 Male, age 74, both hemispheres 38.1
2438 Female, age 94, left hemisphere 34.0
2729 Female, age 91, right hemisphere 28.8
2042 Male, age 76, both hemispheres 20.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.5
Samples: 197

Max nTPM: 190.6
Min nTPM: 7.0
Std nTPM: 34.2
Median nTPM: 44.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 190.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 179.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 150.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 146.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 145.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 135.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 134.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 133.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 130.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 119.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 115.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 137.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 137.0
FF:10169-103B7 60 years, female 153.8
FF:10153-102I9 76 years, female 120.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 62.0
Samples: 4

Max nTPM: 94.0
Min nTPM: 37.1
Sample A Female 94.0
Sample B Female 69.9
Sample C Male 37.1
Sample D Male 46.8
Entorhinal cortex
nTPM: 54.2
Samples: 4

Max nTPM: 59.6
Min nTPM: 48.9
Sample A Female 51.7
Sample B Female 59.6
Sample C Male 56.6
Sample D Male 48.9
Subiculum
nTPM: 41.2
Samples: 4

Max nTPM: 49.3
Min nTPM: 32.7
Sample A Female 49.3
Sample B Female 36.6
Sample C Male 46.0
Sample D Male 32.7
Ventral hippocampus
nTPM: 70.5
Samples: 4

Max nTPM: 94.2
Min nTPM: 42.7
Sample A Female 94.2
Sample B Female 42.7
Sample C Male 90.1
Sample D Male 54.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 132.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 132.7
Samples: 4

Max nTPM: 150.4
Min nTPM: 121.5
Sample A Male 121.5
Sample B Male 135.0
Sample C Female 123.8
Sample D Female 150.4
Hippocampal formation
nTPM: 113.6
Samples: 4

Max nTPM: 118.9
Min nTPM: 107.7
Sample A Male 113.8
Sample B Male 107.7
Sample C Female 118.9
Sample D Female 113.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.5
77620429 Antisense, RP_070205_01_H11, Mouse strain C57BL/6J (56 days, male) 17.8
79490112 Antisense, RP_070205_01_H11, Mouse strain C57BL/6J (56 days, male) 16.8
68196975 Antisense, RP_040928_01_A05, Mouse strain C57BL/6J (56 days, male) 13.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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