HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.9 nTPM
HPA:39.9 nTPM
GTEx:54.3 nTPM
FANTOM5:55.2 Scaled Tags Per Million
Pig:43.0 nTPM
Mouse:58.3 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039169
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.9
Sample id Sample description nTPM
Hippocampus
nTPM: 36.9
1855 Male, age 76, left hemisphere 40.6
1898 Male, age 80, left hemisphere 40.1
1911 Female, age 85, right hemisphere 36.9
2529 Female, age 94, left hemisphere 36.0
2621 Female, age 67, right hemisphere 34.3
2148 Female, age 91, left hemisphere 33.3
Dentate gyrus
nTPM: 37.3
2010 Male, age 76, both hemispheres 41.8
1927 Female, age 91, both hemispheres 39.1
2530 Female, age 94, left hemisphere 38.0
2528 Male, age 74, both hemispheres 37.5
2246 Female, age 85, both hemispheres 36.4
2531 Female, age 67, both hemispheres 31.1
Entorhinal gyrus
nTPM: 34.4
1938 Female, age 85, left hemisphere 37.3
2686 Male, age 75, right hemisphere 35.9
1787 Male, age 76, left hemisphere 35.1
2764 Male, age 80, right hemisphere 34.2
2117 Female, age 91, right hemisphere 33.1
2613 Female, age 94, left hemisphere 30.8
Hippocampus, CA1
nTPM: 39.9
2749 Male, age 80, left hemisphere 47.8
1873 Female, age 85, both hemispheres 43.6
2045 Male, age 76, both hemispheres 41.5
2527 Male, age 74, both hemispheres 34.4
2082 Female, age 91, right hemisphere 32.0
Hippocampus, CA2
nTPM: 37.7
1892 Male, age 76, both hemispheres 42.5
1963 Male, age 80, left hemisphere 41.1
2249 Male, age 74, both hemispheres 39.1
2437 Female, age 94, left hemisphere 36.9
1940 Female, age 85, left hemisphere 34.2
2113 Female, age 91, right hemisphere 32.6
Hippocampus, CA3
nTPM: 35.9
2137 Male, age 80, left hemisphere 39.0
1891 Female, age 85, both hemispheres 38.1
1867 Male, age 76, both hemispheres 37.5
2436 Male, age 74, both hemispheres 36.9
2620 Female, age 94, left hemisphere 33.2
2861 Female, age 67, both hemispheres 30.7
Parahippocampal cortex
nTPM: 35.1
1933 Female, age 85, both hemispheres 38.8
1850 Male, age 80, both hemispheres 37.4
2693 Female, age 94, both hemispheres 37.1
2622 Female, age 67, right hemisphere 35.0
2532 Female, age 72, left hemisphere 34.9
2692 Male, age 74, both hemispheres 34.9
2250 Female, age 67, right hemisphere 34.3
1990 Female, age 91, right hemisphere 33.7
2245 Female, age 91, both hemispheres 32.9
2018 Male, age 76, both hemispheres 31.6
Perirhinal gyrus
nTPM: 36.5
1841 Female, age 85, right hemisphere 39.3
1847 Female, age 91, left hemisphere 36.2
2521 Female, age 94, right hemisphere 36.2
2848 Male, age 76, right hemisphere 35.9
1794 Male, age 80, right hemisphere 34.9
Subiculum
nTPM: 35.3
1977 Female, age 85, both hemispheres 37.1
1901 Male, age 80, both hemispheres 36.6
2042 Male, age 76, both hemispheres 36.1
2438 Female, age 94, left hemisphere 35.4
2729 Female, age 91, right hemisphere 33.4
2619 Male, age 74, both hemispheres 33.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.3
Samples: 197

Max nTPM: 161.1
Min nTPM: 22.8
Std nTPM: 18.1
Median nTPM: 51.3
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 161.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 159.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 106.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 104.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 96.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 95.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 84.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 81.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 80.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 80.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 79.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.2
FF:10169-103B7 60 years, female 72.1
FF:10153-102I9 76 years, female 38.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.4
Samples: 4

Max nTPM: 45.1
Min nTPM: 29.3
Sample A Female 45.1
Sample B Female 37.8
Sample C Male 29.3
Sample D Male 29.5
Entorhinal cortex
nTPM: 37.9
Samples: 4

Max nTPM: 43.4
Min nTPM: 30.7
Sample A Female 36.1
Sample B Female 43.4
Sample C Male 41.3
Sample D Male 30.7
Subiculum
nTPM: 43.1
Samples: 4

Max nTPM: 49.6
Min nTPM: 37.9
Sample A Female 49.6
Sample B Female 42.2
Sample C Male 37.9
Sample D Male 42.5
Ventral hippocampus
nTPM: 37.0
Samples: 4

Max nTPM: 40.3
Min nTPM: 34.3
Sample A Female 36.6
Sample B Female 36.7
Sample C Male 40.3
Sample D Male 34.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.8
Samples: 4

Max nTPM: 62.9
Min nTPM: 50.3
Sample A Male 62.9
Sample B Male 60.5
Sample C Female 57.4
Sample D Female 50.3
Hippocampal formation
nTPM: 58.3
Samples: 4

Max nTPM: 66.2
Min nTPM: 53.5
Sample A Male 66.2
Sample B Male 53.5
Sample C Female 57.1
Sample D Female 56.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
413789 Antisense, RP_040809_01_D10, Mouse strain C57BL/6J (56 days, male) 0.2

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