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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:374.9 nTPM
GTEx:374.9 nTPM
FANTOM5:541.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA029501Antibody CAB019421
Squamous epithelial cells MediumMedium





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 374.9
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 374.9
Samples: 156

Max nTPM: 1302.8
Min nTPM: 103.6
Std nTPM: 212.7
Median nTPM: 327.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 1302.8
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 994.7
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 951.1
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 900.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 870.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 866.4
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 820.4
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 819.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 787.2
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 750.5
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 727.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 723.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 711.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 701.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 685.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 665.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 658.7
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 631.9
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 631.8
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 623.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 615.6
GTEX-14PKU-1326-SM-6871B 40-49 years, female 614.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 612.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 606.0
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 602.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 597.0
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 589.6
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 574.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 546.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 532.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 526.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 525.7
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 516.4
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 516.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 514.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 510.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 500.8
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 491.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 491.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 483.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 483.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 480.4
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 479.7
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 474.4
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 471.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 456.1
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 448.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 440.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 433.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 427.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 423.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 418.7
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 418.1
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 409.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 398.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 394.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 394.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 388.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 386.1
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 385.5
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 385.1
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 383.1
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 382.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 382.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 378.7
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 374.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 366.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 364.4
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 363.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 358.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 356.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 354.0
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 351.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 348.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 346.0
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 344.4
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 330.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 328.9
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 325.7
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 321.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 320.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 319.3
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 312.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 307.3
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 301.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 300.6
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 298.0
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 291.7
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 284.4
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 282.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 282.7
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 279.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 277.3
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 275.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 272.1
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 266.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 264.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 264.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 262.9
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 262.3
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 261.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 261.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 256.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 254.3
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 253.7
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 252.1
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 250.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 247.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 238.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 238.1
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 230.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 228.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 226.1
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 219.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 205.7
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 205.0
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 203.3
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 201.3
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 197.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 194.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 193.4
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 190.7
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 188.1
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 187.8
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 187.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 186.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 182.6
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 181.5
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 178.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 174.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 174.1
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 173.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 173.0
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 167.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 163.9
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 163.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 163.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 162.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 160.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 153.2
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 148.8
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 147.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 143.7
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 141.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 141.1
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 135.4
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 134.6
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 126.3
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 126.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 125.5
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 125.3
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 124.9
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 123.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 116.4
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 112.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 103.6
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 541.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 541.2
FF:10204-103F6 68 years, female 541.2

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