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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:50.9 nTPM
FANTOM5:184.7 Scaled Tags Per Million
Pig:133.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA008394Antibody HPA064788
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 50.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 50.9
Samples: 246

Max nTPM: 442.4
Min nTPM: 1.5
Std nTPM: 40.3
Median nTPM: 49.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 442.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 177.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 145.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 132.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 127.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 116.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 114.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 112.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 109.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 107.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 107.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 106.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 106.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 102.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 102.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 99.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 96.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 94.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 94.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 93.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 92.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 92.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 91.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 91.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 91.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 89.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 89.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 87.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 87.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 86.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 85.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 85.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 83.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 83.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 83.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 83.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 82.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 82.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 81.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 81.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 81.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 81.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 80.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 79.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 79.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 79.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 77.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 76.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 76.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 75.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 75.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 74.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 74.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 74.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 74.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 74.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 74.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 73.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 72.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 72.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 71.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 71.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 71.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 71.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 71.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 71.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 70.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 70.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 70.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 68.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 68.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 67.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 67.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 67.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 66.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 66.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 65.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 65.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 65.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 65.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 64.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 64.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 64.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 63.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 63.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 63.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 62.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 62.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 62.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 60.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 60.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 60.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 59.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 59.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 58.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 58.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 58.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 56.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 56.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 56.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 56.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 56.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 55.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 55.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 55.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 55.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 54.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 54.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 54.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 53.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 53.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 52.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 52.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 52.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 51.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 51.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 51.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 51.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 50.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 50.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 50.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 49.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 49.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 48.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 48.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 46.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 46.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 46.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 45.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 45.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 45.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 45.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 44.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 44.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 43.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 43.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 43.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 42.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 42.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 41.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 41.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 40.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 40.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 40.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 39.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 39.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 38.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 38.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 38.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 37.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 37.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 37.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 36.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 36.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 36.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 35.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 35.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 34.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 34.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 33.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 32.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 32.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 32.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 31.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 31.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 31.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 31.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 30.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 29.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 29.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 29.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 29.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 27.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 27.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 27.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 25.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 24.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 24.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 24.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 24.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 24.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 24.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 24.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 23.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 23.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 22.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 21.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 21.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 20.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 20.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 20.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 19.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 19.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 18.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 17.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 16.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 16.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 16.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 15.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 15.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 14.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 14.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 13.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 13.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 13.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 12.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 12.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 12.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 12.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 12.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 12.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 12.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 12.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 11.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 11.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 11.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 10.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 10.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 9.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 8.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 8.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 8.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 8.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 7.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 7.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 7.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 7.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 6.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 6.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 6.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 5.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 5.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 5.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 5.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 5.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 4.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 4.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 4.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 3.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 3.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 3.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 3.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 3.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 2.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 2.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 184.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 184.7
FF:10164-103B2 76 years, female 184.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 133.7
Pig sample Sample description nTPM
Caudate
nTPM: 133.7
Samples: 4

Max nTPM: 160.2
Min nTPM: 114.6
Sample A Female 114.6
Sample B Female 123.8
Sample C Male 160.2
Sample D Male 136.2

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