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PDZD4
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:163.6 nTPM
FANTOM5:168.7 Scaled Tags Per Million
Pig:87.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003878
Glial cells High
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 163.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 163.6
Samples: 246

Max nTPM: 358.6
Min nTPM: 23.3
Std nTPM: 77.9
Median nTPM: 157.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 358.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 358.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 354.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 352.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 347.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 343.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 341.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 330.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 314.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 309.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 307.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 307.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 302.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 299.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 298.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 293.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 291.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 289.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 288.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 286.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 285.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 283.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 281.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 281.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 275.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 270.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 270.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 267.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 267.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 265.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 263.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 262.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 261.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 260.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 259.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 258.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 255.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 255.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 253.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 248.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 246.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 243.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 243.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 242.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 239.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 236.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 236.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 233.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 229.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 229.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 228.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 228.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 227.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 227.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 222.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 222.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 221.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 221.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 218.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 217.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 215.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 214.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 211.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 209.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 207.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 207.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 207.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 206.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 206.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 203.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 201.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 201.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 200.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 200.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 196.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 196.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 196.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 196.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 195.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 195.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 195.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 194.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 191.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 191.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 191.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 190.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 189.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 187.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 186.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 185.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 185.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 185.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 184.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 183.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 182.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 182.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 181.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 181.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 180.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 180.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 177.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 176.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 176.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 174.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 174.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 173.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 173.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 170.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 170.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 170.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 170.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 169.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 169.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 168.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 168.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 167.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 165.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 164.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 163.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 159.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 158.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 158.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 158.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 156.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 155.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 154.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 152.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 152.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 151.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 150.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 150.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 150.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 149.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 149.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 149.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 148.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 146.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 146.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 145.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 143.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 143.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 142.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 141.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 141.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 140.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 138.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 137.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 135.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 135.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 134.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 133.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 133.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 130.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 129.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 128.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 128.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 127.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 127.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 126.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 126.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 125.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 122.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 119.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 119.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 119.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 117.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 116.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 116.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 115.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 115.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 114.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 113.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 112.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 111.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 110.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 108.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 108.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 107.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 106.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 105.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 105.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 100.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 99.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 98.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 98.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 97.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 97.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 96.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 95.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 95.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 94.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 93.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 92.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 91.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 88.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 87.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 83.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 82.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 82.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 79.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 78.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 77.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 77.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 77.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 77.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 76.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 75.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 75.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 74.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 73.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 71.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 71.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 71.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 71.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 71.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 70.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 70.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 70.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 70.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 69.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 69.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 68.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 67.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 66.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 66.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 65.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 65.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 64.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 61.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 59.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 58.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 57.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 57.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 56.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 56.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 51.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 49.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 49.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 47.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 46.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 43.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 41.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 40.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 35.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 33.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 23.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 168.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 168.7
FF:10164-103B2 76 years, female 168.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 87.7
Pig sample Sample description nTPM
Caudate
nTPM: 87.7
Samples: 4

Max nTPM: 110.6
Min nTPM: 57.1
Sample A Female 57.1
Sample B Female 95.5
Sample C Male 110.6
Sample D Male 87.5

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