COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.4 nTPM
HPA:5.2 nTPM
GTEx:42.4 nTPM
FANTOM5:17.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA058061
Endothelial cells Not detected
Glandular cells Not detected
Peripheral nerve/ganglion High



COLON - HPA RNA-seqi
Average nTPM 5.2
overview
Male, age 54 		Colon sample 67
nTPM: 4.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 2.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 0.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 2.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 3.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 20.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 2.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 2.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 11.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 1.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 3.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 7.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 5.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 42.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 42.4
Samples: 373

Max nTPM: 91.9
Min nTPM: 1.7
Std nTPM: 15.2
Median nTPM: 43.6
GTEX-17F96-2126-SM-7KFSM 70-79 years, male 91.9
GTEX-1LVAN-2626-SM-CNPQF 50-59 years, female 74.5
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 73.7
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 73.6
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 73.1
GTEX-1E2YA-2526-SM-7IGOU 50-59 years, male 72.8
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 72.5
GTEX-1LG7Y-2226-SM-E9U5K 50-59 years, male 71.7
GTEX-1IDJI-2226-SM-CKZPM 50-59 years, female 70.6
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 70.3
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 69.9
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Colon - Transverse
Average nTPM: 18.1
Samples: 406

Max nTPM: 77.1
Min nTPM: 0.4
Std nTPM: 16.1
Median nTPM: 14.5
GTEX-17F96-2026-SM-79ON4 70-79 years, male 77.1
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 63.8
GTEX-17F9E-1826-SM-7IGMC 50-59 years, male 62.5
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 62.4
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 60.5
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 58.6
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 57.2
GTEX-X4EO-2526-SM-EWRM8 60-69 years, female 57.2
GTEX-11GSP-1626-SM-5986N 60-69 years, female 54.9
GTEX-Y114-1526-SM-4TT79 50-59 years, female 54.5
GTEX-1QW4Y-1326-SM-EWRMZ 30-39 years, male 52.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 17.2
FF:10014-101C5 62,83,84 years, mixed 17.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.