We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
LAPTM4A
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • LAPTM4A
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:116.8 nTPM
HPA:116.8 nTPM
GTEx:97.1 nTPM
FANTOM5:110.4 Scaled Tags Per Million
Pig:73.4 nTPM
Mouse:249.2 nTPM

AMYGDALA - HPA Brain RNA-seq
Max nTPM 116.8
Sample id Sample description nTPM
Amygdala
nTPM: 116.8
2514 Male, age 75, right hemisphere 120.6
1987 Female, age 91, left hemisphere 120.2
2814 Male, age 76, right hemisphere 117.3
2695 Female, age 67, right hemisphere 114.5
2517 Female, age 94, left hemisphere 111.3
Basal amygdala
nTPM: 106.5
2110 Male, age 80, left hemisphere 112.0
2609 Male, age 75, right hemisphere 111.3
1955 Male, age 76, both hemispheres 110.5
2243 Female, age 91, right hemisphere 106.7
2685 Female, age 94, left hemisphere 102.9
2827 Female, age 67, right hemisphere 95.5
Central amygdala
nTPM: 111.6
1905 Male, age 76, both hemispheres 116.1
2826 Female, age 94, left hemisphere 114.4
2515 Male, age 75, right hemisphere 113.3
2701 Female, age 91, right hemisphere 107.5
2239 Male, age 80, left hemisphere 106.9
Corticomedial amygdala
nTPM: 109.8
2242 Female, age 91, right hemisphere 117.0
2428 Male, age 75, right hemisphere 116.0
2829 Male, age 80, left hemisphere 115.1
2240 Male, age 76, both hemispheres 109.2
2429 Female, age 94, left hemisphere 106.8
2535 Female, age 67, right hemisphere 94.9
Lateral amygdala
nTPM: 106.6
2516 Male, age 75, right hemisphere 112.4
1883 Male, age 76, both hemispheres 111.9
2534 Female, age 94, left hemisphere 108.5
2256 Male, age 80, left hemisphere 104.2
2255 Female, age 91, right hemisphere 101.5
2830 Female, age 67, right hemisphere 101.1
Stria terminalis, bed nucleus
nTPM: 103.2
1974 Female, age 91, both hemispheres 104.6
2201 Male, age 74, unknown 104.2
2486 Female, age 94, both hemispheres 100.8

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 97.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 97.1
Samples: 152

Max nTPM: 190.1
Min nTPM: 48.6
Std nTPM: 26.1
Median nTPM: 93.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 190.1
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 185.5
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 171.3
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 166.6
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 164.7
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 157.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 147.5
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 142.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 138.8
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 137.7
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 135.9
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 135.1
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 134.1
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 132.8
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 132.8
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 131.5
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 127.1
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 126.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 125.6
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 125.2
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 124.8
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 123.8
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 122.8
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 120.8
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 119.2
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 119.0
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 118.5
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 118.4
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 118.2
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 117.6
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 116.7
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 116.5
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 116.2
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 114.0
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 112.6
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 112.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 112.3
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 111.0
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 109.7
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 109.5
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 108.6
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 108.4
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 108.3
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 107.8
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 107.5
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 107.5
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 107.1
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 106.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 105.7
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 105.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 105.1
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 104.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 104.4
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 104.0
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 104.0
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 103.0
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 102.7
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 100.7
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 100.0
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 100.0
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 99.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 99.4
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 99.2
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 98.1
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 97.9
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 97.8
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 97.7
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 97.7
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 97.5
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 97.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 96.1
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 95.2
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 94.9
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 93.7
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 93.6
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 93.4
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 92.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 92.7
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 91.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 91.6
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 91.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 90.8
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 90.6
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 90.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 90.5
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 88.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 88.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 87.9
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 87.2
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 87.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 87.1
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 86.9
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 86.1
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 86.1
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 86.1
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 85.8
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 85.7
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 85.2
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 85.1
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 85.0
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 84.7
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 84.7
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 83.9
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 83.4
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 83.0
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 82.8
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 82.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 81.8
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 81.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 81.4
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 81.0
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 80.8
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 80.5
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 80.1
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 80.0
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 80.0
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 79.4
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 79.3
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 79.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 79.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 77.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 77.0
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 76.4
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 75.9
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 74.5
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 73.5
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 73.3
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 73.2
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 72.3
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 71.9
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 71.9
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 71.6
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 70.6
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 70.6
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 70.2
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 70.0
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 68.4
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 67.3
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 66.7
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 66.1
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 65.4
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 63.6
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 62.0
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 61.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 59.0
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 58.9
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 57.4
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 51.9
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 51.8
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 51.3
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 48.7
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 48.6
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 110.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 110.4
FF:10151-102I7 76 years, female 110.4

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 73.4
Pig sample Sample description nTPM
Amygdala
nTPM: 73.4
Samples: 4

Max nTPM: 97.8
Min nTPM: 61.8
Sample A Female 97.8
Sample B Female 70.5
Sample C Male 61.8
Sample D Male 63.5

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 249.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 249.2
Samples: 4

Max nTPM: 254.8
Min nTPM: 245.3
Sample A Male 245.3
Sample B Male 245.4
Sample C Female 251.3
Sample D Female 254.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.