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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:248.7 nTPM
GTEx:248.7 nTPM
FANTOM5:257.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA031402Antibody HPA031404
Squamous epithelial cells MediumMedium




VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 248.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 248.7
Samples: 156

Max nTPM: 413.6
Min nTPM: 145.7
Std nTPM: 48.5
Median nTPM: 245.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 413.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 412.0
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 409.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 368.6
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 359.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 341.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 337.1
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 336.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 333.4
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 331.8
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 321.9
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 320.5
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 315.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 311.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 310.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 304.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 303.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 301.2
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 299.8
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 296.1
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 292.0
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 291.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 290.8
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 290.1
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 289.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 287.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 287.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 286.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 283.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 283.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 282.1
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 281.7
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 281.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 279.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 277.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 277.3
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 276.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 275.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 275.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 272.8
GTEX-16NPV-2526-SM-6M483 50-59 years, female 272.6
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 272.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 272.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 272.0
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 271.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 270.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 269.8
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 267.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 265.6
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 265.4
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 265.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 264.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 263.2
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 263.1
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 262.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 262.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 262.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 262.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 260.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 259.8
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 258.9
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 258.7
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 258.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 257.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 257.4
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 256.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 256.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 255.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 253.8
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 253.4
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 252.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 252.6
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 252.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 252.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 250.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 250.7
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 247.9
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 246.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 244.9
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 244.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 244.0
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 242.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 242.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 242.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 241.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 241.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 241.2
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 241.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 240.9
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 239.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 238.3
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 237.8
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 236.3
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 234.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 232.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 231.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 230.7
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 230.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 229.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 229.5
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 228.7
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 227.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 227.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 227.1
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 224.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 224.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 223.9
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 223.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 223.4
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 222.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 220.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 219.5
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 219.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 219.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 218.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 218.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 217.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 217.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 217.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 216.8
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 216.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 214.6
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 213.7
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 213.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 213.2
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 213.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 208.8
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 208.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 207.7
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 204.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 201.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 201.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 200.7
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 199.5
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 198.4
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 197.9
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 197.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 193.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 191.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 191.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 191.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 190.7
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 189.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 188.5
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 182.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 180.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 179.8
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 176.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 174.0
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 172.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 167.4
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 165.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 155.1
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 149.0
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 147.8
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 145.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 257.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 257.1
FF:10204-103F6 68 years, female 257.1

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