HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.2 nTPM
HPA:42.2 nTPM
GTEx:42.0 nTPM
FANTOM5:60.0 Scaled Tags Per Million
Pig:43.9 nTPM
Mouse:85.5 nTPM
Allen mouse:9.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036607
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.2
Sample id Sample description nTPM
Hippocampus
nTPM: 27.1
2621 Female, age 67, right hemisphere 34.1
1898 Male, age 80, left hemisphere 29.4
2148 Female, age 91, left hemisphere 26.4
1855 Male, age 76, left hemisphere 25.6
2529 Female, age 94, left hemisphere 23.7
1911 Female, age 85, right hemisphere 23.3
Dentate gyrus
nTPM: 29.7
2530 Female, age 94, left hemisphere 39.5
1927 Female, age 91, both hemispheres 30.1
2531 Female, age 67, both hemispheres 29.6
2010 Male, age 76, both hemispheres 27.4
2528 Male, age 74, both hemispheres 26.7
2246 Female, age 85, both hemispheres 24.7
Entorhinal gyrus
nTPM: 42.2
2613 Female, age 94, left hemisphere 65.8
2686 Male, age 75, right hemisphere 46.8
2764 Male, age 80, right hemisphere 42.2
1787 Male, age 76, left hemisphere 35.9
1938 Female, age 85, left hemisphere 34.5
2117 Female, age 91, right hemisphere 27.8
Hippocampus, CA1
nTPM: 26.7
2749 Male, age 80, left hemisphere 36.1
2527 Male, age 74, both hemispheres 26.6
1873 Female, age 85, both hemispheres 25.2
2082 Female, age 91, right hemisphere 23.0
2045 Male, age 76, both hemispheres 22.6
Hippocampus, CA2
nTPM: 27.5
2437 Female, age 94, left hemisphere 33.9
1963 Male, age 80, left hemisphere 31.9
1892 Male, age 76, both hemispheres 30.3
1940 Female, age 85, left hemisphere 25.0
2113 Female, age 91, right hemisphere 22.2
2249 Male, age 74, both hemispheres 21.8
Hippocampus, CA3
nTPM: 29.1
2861 Female, age 67, both hemispheres 36.3
2620 Female, age 94, left hemisphere 34.9
2137 Male, age 80, left hemisphere 29.4
1867 Male, age 76, both hemispheres 27.6
1891 Female, age 85, both hemispheres 24.8
2436 Male, age 74, both hemispheres 21.8
Parahippocampal cortex
nTPM: 34.1
2622 Female, age 67, right hemisphere 46.3
2693 Female, age 94, both hemispheres 37.1
1850 Male, age 80, both hemispheres 36.6
2532 Female, age 72, left hemisphere 35.9
2692 Male, age 74, both hemispheres 35.6
1990 Female, age 91, right hemisphere 34.7
2245 Female, age 91, both hemispheres 30.3
1933 Female, age 85, both hemispheres 29.8
2250 Female, age 67, right hemisphere 28.0
2018 Male, age 76, both hemispheres 26.6
Perirhinal gyrus
nTPM: 32.9
1847 Female, age 91, left hemisphere 36.8
1794 Male, age 80, right hemisphere 35.8
2848 Male, age 76, right hemisphere 31.1
2521 Female, age 94, right hemisphere 30.6
1841 Female, age 85, right hemisphere 30.0
Subiculum
nTPM: 30.8
2619 Male, age 74, both hemispheres 35.2
1977 Female, age 85, both hemispheres 33.6
2438 Female, age 94, left hemisphere 33.5
1901 Male, age 80, both hemispheres 30.8
2042 Male, age 76, both hemispheres 28.4
2729 Female, age 91, right hemisphere 23.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.0
Samples: 197

Max nTPM: 73.2
Min nTPM: 19.8
Std nTPM: 10.9
Median nTPM: 40.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 73.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 70.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 70.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 67.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 65.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 64.8
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 63.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 61.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 61.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 61.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 61.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.0
FF:10169-103B7 60 years, female 60.6
FF:10153-102I9 76 years, female 59.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.4
Samples: 4

Max nTPM: 50.8
Min nTPM: 33.4
Sample A Female 50.8
Sample B Female 41.5
Sample C Male 43.8
Sample D Male 33.4
Entorhinal cortex
nTPM: 44.0
Samples: 4

Max nTPM: 45.2
Min nTPM: 41.7
Sample A Female 45.2
Sample B Female 44.2
Sample C Male 44.7
Sample D Male 41.7
Subiculum
nTPM: 40.4
Samples: 4

Max nTPM: 54.3
Min nTPM: 32.6
Sample A Female 54.3
Sample B Female 34.6
Sample C Male 40.1
Sample D Male 32.6
Ventral hippocampus
nTPM: 42.1
Samples: 4

Max nTPM: 54.3
Min nTPM: 28.9
Sample A Female 40.7
Sample B Female 28.9
Sample C Male 54.3
Sample D Male 44.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 85.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 85.5
Samples: 4

Max nTPM: 90.2
Min nTPM: 79.5
Sample A Male 83.8
Sample B Male 88.5
Sample C Female 79.5
Sample D Female 90.2
Hippocampal formation
nTPM: 73.4
Samples: 4

Max nTPM: 75.6
Min nTPM: 70.5
Sample A Male 75.1
Sample B Male 70.5
Sample C Female 72.3
Sample D Female 75.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.6
68844032 Antisense, RP_050217_02_G06, Mouse strain C57BL/6J (56 days, male) 11.5
74819327 Antisense, RP_060315_02_E03, Mouse strain C57BL/6J (56 days, male) 7.7

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The Human Protein Atlas

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