HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:141.6 nTPM
HPA:141.6 nTPM
GTEx:150.1 nTPM
FANTOM5:143.7 Scaled Tags Per Million
Pig:169.2 nTPM
Mouse:315.0 nTPM
Allen mouse:8.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB001975
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 141.6
Sample id Sample description nTPM
Hippocampus
nTPM: 107.5
2621 Female, age 67, right hemisphere 162.3
2148 Female, age 91, left hemisphere 140.6
1898 Male, age 80, left hemisphere 121.7
1855 Male, age 76, left hemisphere 84.6
2529 Female, age 94, left hemisphere 72.9
1911 Female, age 85, right hemisphere 62.9
Dentate gyrus
nTPM: 120.1
2531 Female, age 67, both hemispheres 192.7
1927 Female, age 91, both hemispheres 183.6
2530 Female, age 94, left hemisphere 104.7
2528 Male, age 74, both hemispheres 100.4
2010 Male, age 76, both hemispheres 83.5
2246 Female, age 85, both hemispheres 55.5
Entorhinal gyrus
nTPM: 61.7
2613 Female, age 94, left hemisphere 99.1
2686 Male, age 75, right hemisphere 80.3
2764 Male, age 80, right hemisphere 72.0
1787 Male, age 76, left hemisphere 59.6
1938 Female, age 85, left hemisphere 44.9
2117 Female, age 91, right hemisphere 14.4
Hippocampus, CA1
nTPM: 126.5
2749 Male, age 80, left hemisphere 245.8
2527 Male, age 74, both hemispheres 117.1
2045 Male, age 76, both hemispheres 107.0
1873 Female, age 85, both hemispheres 102.9
2082 Female, age 91, right hemisphere 59.6
Hippocampus, CA2
nTPM: 91.8
1963 Male, age 80, left hemisphere 177.3
1892 Male, age 76, both hemispheres 117.0
2437 Female, age 94, left hemisphere 102.9
2113 Female, age 91, right hemisphere 65.1
2249 Male, age 74, both hemispheres 54.4
1940 Female, age 85, left hemisphere 34.0
Hippocampus, CA3
nTPM: 141.6
2861 Female, age 67, both hemispheres 229.2
2620 Female, age 94, left hemisphere 227.6
2137 Male, age 80, left hemisphere 181.9
1867 Male, age 76, both hemispheres 98.4
1891 Female, age 85, both hemispheres 56.1
2436 Male, age 74, both hemispheres 56.1
Parahippocampal cortex
nTPM: 70.1
2245 Female, age 91, both hemispheres 119.6
2622 Female, age 67, right hemisphere 87.2
1850 Male, age 80, both hemispheres 85.4
2693 Female, age 94, both hemispheres 82.3
2250 Female, age 67, right hemisphere 67.6
1990 Female, age 91, right hemisphere 65.8
1933 Female, age 85, both hemispheres 55.2
2018 Male, age 76, both hemispheres 51.5
2692 Male, age 74, both hemispheres 48.3
2532 Female, age 72, left hemisphere 38.0
Perirhinal gyrus
nTPM: 106.7
1847 Female, age 91, left hemisphere 144.7
2521 Female, age 94, right hemisphere 133.2
1794 Male, age 80, right hemisphere 128.2
1841 Female, age 85, right hemisphere 78.2
2848 Male, age 76, right hemisphere 49.1
Subiculum
nTPM: 58.5
1901 Male, age 80, both hemispheres 87.0
2438 Female, age 94, left hemisphere 63.9
2729 Female, age 91, right hemisphere 62.3
2619 Male, age 74, both hemispheres 54.9
1977 Female, age 85, both hemispheres 48.9
2042 Male, age 76, both hemispheres 33.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 150.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 150.1
Samples: 197

Max nTPM: 343.1
Min nTPM: 6.3
Std nTPM: 83.8
Median nTPM: 151.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 343.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 336.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 330.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 328.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 326.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 317.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 309.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 301.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 301.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 295.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 289.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 143.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 143.7
FF:10169-103B7 60 years, female 191.4
FF:10153-102I9 76 years, female 96.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 169.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 169.2
Samples: 4

Max nTPM: 218.8
Min nTPM: 129.9
Sample A Female 218.8
Sample B Female 176.2
Sample C Male 151.9
Sample D Male 129.9
Entorhinal cortex
nTPM: 152.8
Samples: 4

Max nTPM: 159.9
Min nTPM: 139.2
Sample A Female 159.9
Sample B Female 158.9
Sample C Male 153.3
Sample D Male 139.2
Subiculum
nTPM: 120.9
Samples: 4

Max nTPM: 164.3
Min nTPM: 88.3
Sample A Female 164.3
Sample B Female 99.8
Sample C Male 131.1
Sample D Male 88.3
Ventral hippocampus
nTPM: 153.1
Samples: 4

Max nTPM: 183.5
Min nTPM: 107.2
Sample A Female 151.1
Sample B Female 107.2
Sample C Male 170.5
Sample D Male 183.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 315.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 188.8
Samples: 4

Max nTPM: 212.8
Min nTPM: 158.1
Sample A Male 212.8
Sample B Male 176.0
Sample C Female 208.4
Sample D Female 158.1
Hippocampal formation
nTPM: 315.1
Samples: 4

Max nTPM: 361.0
Min nTPM: 285.7
Sample A Male 285.7
Sample B Male 317.0
Sample C Female 361.0
Sample D Female 296.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.3
1754 Antisense, RP_040526_01_F09, Mouse strain C57BL/6J (56 days, male) 8.3
1755 Antisense, RP_040526_01_F09, Mouse strain C57BL/6J (56 days, male) 3.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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