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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:161.2 nTPM
GTEx:161.2 nTPM
FANTOM5:56.6 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA048963Antibody CAB020697
Squamous epithelial cells LowLow





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 161.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 161.2
Samples: 156

Max nTPM: 353.4
Min nTPM: 33.7
Std nTPM: 70.9
Median nTPM: 155.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 353.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 350.2
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 348.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 347.9
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 340.8
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 323.4
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 315.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 300.8
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 284.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 282.1
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 276.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 273.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 270.2
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 266.6
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 264.3
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 251.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 248.8
GTEX-S341-1226-SM-4AD5S 40-49 years, female 246.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 246.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 244.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 243.7
GTEX-14PKU-1326-SM-6871B 40-49 years, female 237.9
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 235.6
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 232.7
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 230.1
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 229.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 226.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 223.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 219.1
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 215.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 211.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 211.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 210.3
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 208.8
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 207.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 207.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 205.7
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 205.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 204.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 202.5
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 201.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 199.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 197.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 194.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 191.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 189.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 188.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 187.7
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 187.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 186.8
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 184.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 184.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 184.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 182.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 181.1
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 180.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 179.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 178.8
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 178.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 178.2
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 178.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 176.8
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 175.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 175.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 175.2
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 172.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 171.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 170.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 169.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 167.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 166.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 166.0
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 162.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 159.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 159.6
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 158.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 157.5
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 156.5
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 154.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 153.8
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 153.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 153.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 152.9
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 151.2
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 150.6
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 148.7
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 148.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 147.1
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 145.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 144.6
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 143.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 141.5
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 140.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 140.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 139.6
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 138.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 138.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 131.9
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 130.5
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 129.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 127.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 126.8
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 124.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 123.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 123.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 123.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 122.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 118.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 118.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 117.0
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 116.9
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 115.3
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 114.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 114.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 111.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 111.3
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 109.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 101.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 101.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 100.8
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 100.4
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 99.3
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 96.9
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 96.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 95.9
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 93.7
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 93.3
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 92.3
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 88.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 87.3
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 87.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 86.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 77.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 76.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 76.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 76.1
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 76.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 74.2
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 74.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 73.6
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 72.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 72.3
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 71.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 68.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 66.8
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 66.0
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 64.8
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 62.0
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 62.0
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 61.5
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 56.0
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 54.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 52.6
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 49.3
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 45.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 33.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 56.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 56.6
FF:10204-103F6 68 years, female 56.6

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