We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ATP1B3
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • ATP1B3
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:125.0 nTPM
HPA:113.4 nTPM
GTEx:125.0 nTPM
FANTOM5:216.5 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA048963Antibody CAB020697
Glandular cells MediumMedium





SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 113.4
overview
Male, age 65
Small intestine sample 232
nTPM: 107.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 118.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 76.2
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 151.3

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 125.0
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 125.0
Samples: 187

Max nTPM: 343.7
Min nTPM: 39.1
Std nTPM: 70.4
Median nTPM: 106.0
GTEX-111YS-1426-SM-5GID8 60-69 years, male 343.7
GTEX-1122O-1326-SM-5H11F 60-69 years, female 327.5
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 305.3
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 281.7
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 275.8
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 270.4
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 269.2
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 267.5
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 266.2
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 265.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 264.3
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 254.0
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 248.5
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 247.0
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 246.7
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 245.0
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 242.4
GTEX-ZTSS-0926-SM-59865 40-49 years, male 241.4
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 240.6
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 238.4
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 237.5
GTEX-144GM-1026-SM-79OKU 20-29 years, male 233.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 232.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 231.3
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 230.4
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 225.3
GTEX-14PN3-2026-SM-68729 60-69 years, female 220.4
GTEX-YFCO-1326-SM-664NV 40-49 years, male 215.9
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 215.0
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 208.7
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 206.6
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 201.1
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 200.8
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 200.4
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 191.1
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 190.4
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 186.9
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 186.1
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 185.1
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 180.5
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 180.1
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 174.8
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 173.9
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 173.1
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 170.4
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 169.8
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 167.0
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 163.1
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 159.2
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 158.9
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 158.8
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 157.1
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 155.7
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 150.5
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 149.1
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 148.3
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 148.1
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 147.2
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 145.3
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 144.1
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 144.1
GTEX-13113-1226-SM-5EGHT 60-69 years, female 144.0
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 142.2
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 142.1
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 141.5
GTEX-14PKU-1626-SM-6871C 40-49 years, female 140.5
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 138.7
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 138.3
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 137.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 137.4
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 135.1
GTEX-1192X-2526-SM-59868 50-59 years, male 134.8
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 134.3
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 134.1
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 133.8
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 133.3
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 133.2
GTEX-14PK6-1626-SM-6871I 70-79 years, female 132.9
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 130.6
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 122.6
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 122.4
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 120.9
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 120.5
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 119.4
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 118.4
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 116.4
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 115.1
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 113.7
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 111.0
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 110.1
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 109.4
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 108.8
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 107.9
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 106.0
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 104.1
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 104.1
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 101.9
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 101.8
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 96.1
GTEX-13O61-1326-SM-5KM31 60-69 years, male 96.0
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 95.6
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 95.3
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 94.2
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 91.5
GTEX-1C475-1426-SM-793CH 40-49 years, female 90.9
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 88.7
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 88.6
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 87.3
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 87.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 85.9
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 84.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 84.7
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 84.6
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 84.3
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 83.8
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 83.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 82.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 82.5
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 80.7
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 80.6
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 80.2
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 80.0
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 79.2
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 78.1
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 78.1
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 78.1
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 75.3
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 74.5
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 73.7
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 72.9
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 72.3
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 71.4
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 71.4
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 71.0
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 70.2
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 68.9
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 68.5
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 67.5
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 67.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 65.8
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 65.7
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 64.7
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 64.1
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 64.1
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 63.8
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 63.0
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 62.2
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 61.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 60.9
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 60.1
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 59.6
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 59.1
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 59.1
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 59.0
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 58.7
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 57.5
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 57.4
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 57.4
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 57.2
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 56.5
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 56.2
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 55.9
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 54.8
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 54.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 54.2
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 54.1
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 54.0
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 52.8
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 52.3
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 51.8
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 51.7
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 51.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 51.1
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 50.9
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 47.8
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 47.1
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 45.9
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 45.7
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 45.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 44.8
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 44.0
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 43.6
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 43.1
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 42.6
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 41.7
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 39.4
GTEX-183FY-1626-SM-793D8 20-29 years, male 39.1
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 216.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 216.5
FF:10024-101D6 15,40,85 years, mixed 216.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.