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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA044198
Pigment epithelial cells
High
Photoreceptor cells
High
Limiting membrane
High
Outer plexiform layer
High
Inner nuclear layer
High
Inner plexiform layer
High
Ganglion cells
High
Nerve fiber layer
High
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 182.8
Min nTPM: 47.4
Std nTPM: 22.6
Median nTPM:
6_1
73 years, female
182.8
379_1
60 years, male
177.5
218_1
71 years, female
158.9
35_1
74 years, female
155.3
352_1
62 years, male
154.4
386_1
76 years, male
154.3
126_1
63 years, male
150.4
447_1
81 years, male
149.7
243_1
75 years, male
148.1
145_1
84 years, male
147.7
347_1
72 years, male
147.2
115_1
83 years, male
146.2
354_1
81 years, female
146.2
42_1
85 years, male
143.9
355_1
70 years, female
143.5
353_1
82 years, female
142.7
506_1
65 years, male
141.1
117_1
61 years, male
139.9
237_1
82 years, male
139.7
350_1
84 years, female
138.3
18_1
88 years, male
137.1
177_1
74 years, male
136.6
384_1
83 years, male
136.4
173_1
67 years, male
136.3
321_1
62 years, female
135.7
356_1
87 years, female
134.3
503_1
68 years, male
133.1
120_1
70 years, female
132.9
81_1
67 years, male
132.6
9_1
66 years, female
132.4
4_1
88 years, female
131.6
349_1
83 years, male
131.6
137_1
83 years, male
130.9
142_1
61 years, female
129.7
375_1
74 years, female
128.2
217_1
76 years, male
127.9
389_1
86 years, female
126.8
311_1
78 years, male
126.7
324_1
76 years, male
126.1
17_1
71 years, male
125.7
172_1
72 years, female
125.7
292_1
71 years, male
125.6
163_1
78 years, male
125.5
517_1
88 years, male
125.5
318_1
68 years, male
125.1
376_1
75 years, female
124.8
43_1
64 years, female
124.3
396_1
62 years, male
123.8
348_1
84 years, male
123.7
291_1
76 years, male
123.4
320_1
89 years, female
123.4
316_1
62 years, male
122.3
526_1
61 years, male
121.9
394_1
75 years, female
121.8
322_1
76 years, male
121.3
99_1
64 years, male
120.5
351_1
91 years, male
120.2
286_1
68 years, female
119.1
153_1
70 years, female
119.0
335_1
73 years, female
118.8
518_1
75 years, female
116.5
307_1
66 years, female
116.3
319_1
81 years, male
116.1
406_1
79 years, male
116.0
189_1
76 years, male
115.5
499_1
55 years, female
114.6
295_1
61 years, female
114.4
452_1
88 years, female
114.3
265_1
87 years, male
113.3
246_1
77 years, male
113.0
139_1
64 years, female
112.6
404_1
82 years, female
111.3
264_1
73 years, female
111.1
119_1
70 years, female
110.8
480_1
63 years, male
110.1
377_1
82 years, female
109.4
293_1
68 years, female
109.3
468_1
89 years, male
108.8
425_1
59 years, female
108.2
314_1
67 years, male
108.0
288_1
66 years, female
107.8
229_1
69 years, female
107.6
405_1
91 years, male
107.3
162_1
79 years, female
106.9
266_1
85 years, male
105.7
317_1
60 years, male
105.4
109_1
81 years, female
105.2
32_1
67 years, male
103.9
313_1
79 years, female
99.6
251_1
78 years, male
98.6
315_1
62 years, female
98.5
254_1
77 years, female
94.4
149_1
88 years, male
89.4
495_1
57 years, female
89.0
308_1
70 years, female
88.8
415_1
77 years, female
88.7
41_1
94 years, female
85.9
466_1
57 years, female
84.5
2_1
77 years, female
84.1
89_1
63 years, male
82.1
490_1
67 years, female
78.3
501_1
88 years, male
73.3
491_1
89 years, female
66.5
414_1
84 years, female
60.5
413_1
59 years, female
47.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
