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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:195.2 nTPM
FANTOM5:197.9 Scaled Tags Per Million
Pig:278.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA035611Antibody CAB037073
Glial cells LowHigh
Neuronal cells HighHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 195.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 195.2
Samples: 246

Max nTPM: 434.2
Min nTPM: 99.5
Std nTPM: 54.2
Median nTPM: 189.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 434.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 430.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 416.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 387.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 362.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 333.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 330.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 319.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 309.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 303.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 296.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 293.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 285.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 283.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 281.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 278.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 276.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 274.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 273.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 268.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 263.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 260.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 260.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 259.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 257.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 257.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 254.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 253.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 252.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 251.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 250.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 249.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 248.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 247.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 247.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 244.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 241.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 241.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 241.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 239.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 239.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 236.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 235.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 234.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 233.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 232.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 230.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 230.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 229.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 229.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 229.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 226.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 225.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 223.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 223.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 223.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 222.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 221.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 219.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 219.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 219.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 218.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 218.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 217.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 217.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 216.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 216.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 215.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 214.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 214.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 214.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 214.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 213.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 213.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 213.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 212.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 212.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 211.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 211.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 211.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 210.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 210.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 210.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 209.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 209.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 209.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 208.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 207.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 207.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 207.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 207.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 202.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 201.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 200.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 200.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 200.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 200.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 199.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 199.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 198.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 198.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 198.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 197.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 197.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 197.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 196.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 196.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 196.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 195.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 195.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 194.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 194.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 193.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 192.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 192.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 192.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 192.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 192.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 192.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 191.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 191.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 189.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 189.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 189.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 189.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 188.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 188.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 187.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 187.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 187.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 186.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 186.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 185.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 184.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 182.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 181.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 181.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 180.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 180.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 180.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 179.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 179.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 178.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 177.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 177.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 177.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 177.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 176.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 176.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 175.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 175.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 175.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 175.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 174.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 172.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 172.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 172.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 172.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 172.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 171.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 171.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 170.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 170.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 169.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 169.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 168.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 168.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 166.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 165.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 162.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 162.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 162.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 161.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 161.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 161.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 160.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 159.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 159.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 159.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 158.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 158.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 157.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 157.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 157.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 156.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 156.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 155.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 155.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 154.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 153.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 153.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 151.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 151.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 150.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 149.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 149.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 148.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 148.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 147.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 147.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 147.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 146.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 146.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 145.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 145.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 145.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 144.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 144.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 142.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 142.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 142.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 141.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 141.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 141.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 140.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 140.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 139.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 139.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 137.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 136.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 136.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 136.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 135.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 135.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 135.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 134.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 134.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 132.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 132.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 132.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 131.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 130.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 129.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 128.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 128.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 127.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 126.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 123.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 122.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 121.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 119.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 114.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 109.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 108.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 105.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 99.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 197.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 197.9
FF:10164-103B2 76 years, female 197.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 278.2
Pig sample Sample description nTPM
Caudate
nTPM: 278.2
Samples: 4

Max nTPM: 325.7
Min nTPM: 262.2
Sample A Female 262.3
Sample B Female 262.2
Sample C Male 325.7
Sample D Male 262.7

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