HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:116.2 nTPM
HPA:116.2 nTPM
GTEx:100.9 nTPM
FANTOM5:229.4 Scaled Tags Per Million
Pig:90.1 nTPM
Mouse:76.6 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074007
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 116.2
Sample id Sample description nTPM
Hippocampus
nTPM: 93.6
1911 Female, age 85, right hemisphere 106.0
2529 Female, age 94, left hemisphere 97.9
2621 Female, age 67, right hemisphere 91.8
1898 Male, age 80, left hemisphere 91.4
2148 Female, age 91, left hemisphere 89.8
1855 Male, age 76, left hemisphere 84.6
Dentate gyrus
nTPM: 95.3
2530 Female, age 94, left hemisphere 117.9
2528 Male, age 74, both hemispheres 100.3
2010 Male, age 76, both hemispheres 99.8
2246 Female, age 85, both hemispheres 90.4
1927 Female, age 91, both hemispheres 81.7
2531 Female, age 67, both hemispheres 81.5
Entorhinal gyrus
nTPM: 97.5
2117 Female, age 91, right hemisphere 135.6
2764 Male, age 80, right hemisphere 105.3
1938 Female, age 85, left hemisphere 88.1
2686 Male, age 75, right hemisphere 88.0
2613 Female, age 94, left hemisphere 86.7
1787 Male, age 76, left hemisphere 81.0
Hippocampus, CA1
nTPM: 83.6
2082 Female, age 91, right hemisphere 95.1
2527 Male, age 74, both hemispheres 92.9
1873 Female, age 85, both hemispheres 90.5
2749 Male, age 80, left hemisphere 73.8
2045 Male, age 76, both hemispheres 65.7
Hippocampus, CA2
nTPM: 99.7
1963 Male, age 80, left hemisphere 113.9
2249 Male, age 74, both hemispheres 112.8
2113 Female, age 91, right hemisphere 102.6
1940 Female, age 85, left hemisphere 97.9
2437 Female, age 94, left hemisphere 96.4
1892 Male, age 76, both hemispheres 74.7
Hippocampus, CA3
nTPM: 82.7
1891 Female, age 85, both hemispheres 127.8
1867 Male, age 76, both hemispheres 86.2
2436 Male, age 74, both hemispheres 83.6
2620 Female, age 94, left hemisphere 67.7
2137 Male, age 80, left hemisphere 67.6
2861 Female, age 67, both hemispheres 63.4
Parahippocampal cortex
nTPM: 87.5
1990 Female, age 91, right hemisphere 108.7
2692 Male, age 74, both hemispheres 100.7
2532 Female, age 72, left hemisphere 98.9
2018 Male, age 76, both hemispheres 91.6
1850 Male, age 80, both hemispheres 89.0
2245 Female, age 91, both hemispheres 86.3
1933 Female, age 85, both hemispheres 85.4
2693 Female, age 94, both hemispheres 77.0
2250 Female, age 67, right hemisphere 73.1
2622 Female, age 67, right hemisphere 64.0
Perirhinal gyrus
nTPM: 75.1
2521 Female, age 94, right hemisphere 77.5
1847 Female, age 91, left hemisphere 76.8
2848 Male, age 76, right hemisphere 76.8
1794 Male, age 80, right hemisphere 72.7
1841 Female, age 85, right hemisphere 71.6
Subiculum
nTPM: 116.2
2042 Male, age 76, both hemispheres 142.4
1901 Male, age 80, both hemispheres 132.2
1977 Female, age 85, both hemispheres 116.2
2438 Female, age 94, left hemisphere 108.3
2729 Female, age 91, right hemisphere 99.3
2619 Male, age 74, both hemispheres 98.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 100.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 100.9
Samples: 197

Max nTPM: 276.1
Min nTPM: 13.0
Std nTPM: 54.0
Median nTPM: 87.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 276.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 268.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 256.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 252.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 232.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 229.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 220.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 218.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 205.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 198.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 197.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 229.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 229.4
FF:10153-102I9 76 years, female 309.1
FF:10169-103B7 60 years, female 149.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 90.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 90.1
Samples: 4

Max nTPM: 135.6
Min nTPM: 37.5
Sample A Female 135.6
Sample B Female 70.4
Sample C Male 117.0
Sample D Male 37.5
Entorhinal cortex
nTPM: 40.3
Samples: 4

Max nTPM: 55.2
Min nTPM: 32.7
Sample A Female 35.1
Sample B Female 55.2
Sample C Male 32.7
Sample D Male 38.1
Subiculum
nTPM: 42.4
Samples: 4

Max nTPM: 51.4
Min nTPM: 34.1
Sample A Female 43.4
Sample B Female 51.4
Sample C Male 34.1
Sample D Male 40.6
Ventral hippocampus
nTPM: 59.7
Samples: 4

Max nTPM: 80.1
Min nTPM: 40.8
Sample A Female 71.7
Sample B Female 40.8
Sample C Male 46.0
Sample D Male 80.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 76.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.1
Samples: 4

Max nTPM: 62.2
Min nTPM: 38.0
Sample A Male 62.2
Sample B Male 49.5
Sample C Female 50.5
Sample D Female 38.0
Hippocampal formation
nTPM: 76.7
Samples: 4

Max nTPM: 102.5
Min nTPM: 60.5
Sample A Male 60.5
Sample B Male 69.5
Sample C Female 102.5
Sample D Female 74.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
77925099 Antisense, RP_070320_02_C03, Mouse strain C57BL/6J (56 days, male) 2.9
68499189 Antisense, RP_050118_01_B02, Mouse strain C57BL/6J (56 days, male) 1.6
74749271 Antisense, RP_051219_01_B09, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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