COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Low
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:82.7 nTPM
HPA:10.4 nTPM
GTEx:82.7 nTPM
FANTOM5:37.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA045378Antibody CAB024899
Endothelial cells Not detectedHigh
Glandular cells LowMedium
Peripheral nerve/ganglion LowMedium




COLON - HPA RNA-seqi
Average nTPM 10.4
overview
Male, age 54 		Colon sample 67
nTPM: 11.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 8.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 14.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 14.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 18.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 10.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 5.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 14.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 2.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 4.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 8.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 16.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 82.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 82.7
Samples: 373

Max nTPM: 475.7
Min nTPM: 8.9
Std nTPM: 61.7
Median nTPM: 65.6
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 475.7
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 420.9
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 383.6
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 355.9
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 276.2
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 273.1
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 258.6
GTEX-1HBPH-2526-SM-ACKXK 40-49 years, female 255.2
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 253.2
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 249.2
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 249.0
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Colon - Transverse
Average nTPM: 46.3
Samples: 406

Max nTPM: 258.1
Min nTPM: 5.0
Std nTPM: 41.0
Median nTPM: 32.2
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 258.1
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 230.8
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 214.4
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 199.1
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 195.2
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 192.3
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 190.3
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 190.1
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 186.8
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 180.8
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 176.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 37.3
FF:10014-101C5 62,83,84 years, mixed 37.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.