HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:453.1 nTPM
HPA:453.1 nTPM
GTEx:450.9 nTPM
FANTOM5:878.3 Scaled Tags Per Million
Pig:878.9 nTPM
Mouse:1433.4 nTPM
Allen mouse:23.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051783Antibody HPA051785Antibody HPA053973Antibody CAB004330
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells HighMediumHighHigh









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 453.1
Sample id Sample description nTPM
Hippocampus
nTPM: 410.4
2621 Female, age 67, right hemisphere 687.1
2148 Female, age 91, left hemisphere 595.4
1911 Female, age 85, right hemisphere 375.2
1898 Male, age 80, left hemisphere 351.3
2529 Female, age 94, left hemisphere 252.6
1855 Male, age 76, left hemisphere 200.9
Dentate gyrus
nTPM: 437.8
1927 Female, age 91, both hemispheres 851.2
2531 Female, age 67, both hemispheres 627.3
2530 Female, age 94, left hemisphere 404.3
2528 Male, age 74, both hemispheres 349.5
2010 Male, age 76, both hemispheres 203.4
2246 Female, age 85, both hemispheres 190.8
Entorhinal gyrus
nTPM: 105.8
2613 Female, age 94, left hemisphere 262.5
2764 Male, age 80, right hemisphere 113.2
1938 Female, age 85, left hemisphere 102.3
2686 Male, age 75, right hemisphere 87.2
1787 Male, age 76, left hemisphere 44.2
2117 Female, age 91, right hemisphere 25.5
Hippocampus, CA1
nTPM: 442.5
2749 Male, age 80, left hemisphere 885.8
2527 Male, age 74, both hemispheres 525.6
1873 Female, age 85, both hemispheres 432.6
2082 Female, age 91, right hemisphere 201.9
2045 Male, age 76, both hemispheres 166.4
Hippocampus, CA2
nTPM: 339.0
1963 Male, age 80, left hemisphere 872.5
2113 Female, age 91, right hemisphere 313.7
2249 Male, age 74, both hemispheres 296.7
1892 Male, age 76, both hemispheres 274.6
2437 Female, age 94, left hemisphere 164.0
1940 Female, age 85, left hemisphere 112.5
Hippocampus, CA3
nTPM: 453.1
2137 Male, age 80, left hemisphere 843.7
2861 Female, age 67, both hemispheres 713.5
2620 Female, age 94, left hemisphere 629.6
2436 Male, age 74, both hemispheres 275.0
1891 Female, age 85, both hemispheres 138.8
1867 Male, age 76, both hemispheres 118.0
Parahippocampal cortex
nTPM: 181.2
2245 Female, age 91, both hemispheres 589.2
2693 Female, age 94, both hemispheres 233.4
2622 Female, age 67, right hemisphere 201.2
2250 Female, age 67, right hemisphere 190.7
1850 Male, age 80, both hemispheres 171.7
1933 Female, age 85, both hemispheres 126.6
1990 Female, age 91, right hemisphere 108.7
2018 Male, age 76, both hemispheres 86.4
2532 Female, age 72, left hemisphere 76.1
2692 Male, age 74, both hemispheres 27.6
Perirhinal gyrus
nTPM: 263.2
1847 Female, age 91, left hemisphere 372.2
2521 Female, age 94, right hemisphere 311.2
1841 Female, age 85, right hemisphere 283.7
1794 Male, age 80, right hemisphere 281.2
2848 Male, age 76, right hemisphere 67.6
Subiculum
nTPM: 93.4
2729 Female, age 91, right hemisphere 223.0
1901 Male, age 80, both hemispheres 203.3
2042 Male, age 76, both hemispheres 75.4
1977 Female, age 85, both hemispheres 33.1
2619 Male, age 74, both hemispheres 25.8
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 450.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 450.9
Samples: 197

Max nTPM: 1340.3
Min nTPM: 3.5
Std nTPM: 293.7
Median nTPM: 398.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1340.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 1212.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1171.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1153.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 1082.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 1076.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1058.3
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 1012.2
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 980.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 967.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 959.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 878.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 878.3
FF:10169-103B7 60 years, female 1295.3
FF:10153-102I9 76 years, female 461.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 878.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 734.8
Samples: 4

Max nTPM: 933.6
Min nTPM: 476.1
Sample A Female 933.6
Sample B Female 832.4
Sample C Male 476.1
Sample D Male 697.1
Entorhinal cortex
nTPM: 878.9
Samples: 4

Max nTPM: 1000.1
Min nTPM: 740.9
Sample A Female 1000.1
Sample B Female 865.3
Sample C Male 909.2
Sample D Male 740.9
Subiculum
nTPM: 455.3
Samples: 4

Max nTPM: 616.9
Min nTPM: 386.1
Sample A Female 616.9
Sample B Female 402.4
Sample C Male 415.9
Sample D Male 386.1
Ventral hippocampus
nTPM: 609.5
Samples: 4

Max nTPM: 1084.1
Min nTPM: 381.8
Sample A Female 381.8
Sample B Female 428.5
Sample C Male 543.6
Sample D Male 1084.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1433.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1127.4
Samples: 4

Max nTPM: 1221.5
Min nTPM: 1057.4
Sample A Male 1221.5
Sample B Male 1083.8
Sample C Female 1147.0
Sample D Female 1057.4
Hippocampal formation
nTPM: 1433.4
Samples: 4

Max nTPM: 1504.2
Min nTPM: 1294.9
Sample A Male 1503.9
Sample B Male 1430.4
Sample C Female 1504.2
Sample D Female 1294.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.3
79360274 Antisense, RP_071018_01_G03, Mouse strain C57BL/6J (56 days, male) 23.3
79490122 Antisense, RP_071018_01_G03, Mouse strain C57BL/6J (56 days, male) 18.0

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The Human Protein Atlas

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