HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.9 nTPM
HPA:27.9 nTPM
GTEx:32.9 nTPM
FANTOM5:22.7 Scaled Tags Per Million
Pig:14.7 nTPM
Mouse:23.4 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031004Antibody CAB016116
Glial cells MediumNot detected
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.9
Sample id Sample description nTPM
Hippocampus
nTPM: 23.9
2148 Female, age 91, left hemisphere 27.3
1911 Female, age 85, right hemisphere 26.9
2621 Female, age 67, right hemisphere 25.6
2529 Female, age 94, left hemisphere 22.0
1855 Male, age 76, left hemisphere 21.4
1898 Male, age 80, left hemisphere 19.9
Dentate gyrus
nTPM: 22.8
1927 Female, age 91, both hemispheres 27.5
2531 Female, age 67, both hemispheres 27.1
2246 Female, age 85, both hemispheres 21.3
2010 Male, age 76, both hemispheres 21.1
2528 Male, age 74, both hemispheres 20.2
2530 Female, age 94, left hemisphere 19.9
Entorhinal gyrus
nTPM: 21.0
1938 Female, age 85, left hemisphere 24.5
1787 Male, age 76, left hemisphere 24.4
2117 Female, age 91, right hemisphere 20.5
2613 Female, age 94, left hemisphere 18.8
2764 Male, age 80, right hemisphere 18.8
2686 Male, age 75, right hemisphere 18.7
Hippocampus, CA1
nTPM: 25.9
2749 Male, age 80, left hemisphere 34.1
2045 Male, age 76, both hemispheres 29.0
1873 Female, age 85, both hemispheres 24.5
2527 Male, age 74, both hemispheres 21.9
2082 Female, age 91, right hemisphere 19.9
Hippocampus, CA2
nTPM: 23.4
1892 Male, age 76, both hemispheres 27.5
1940 Female, age 85, left hemisphere 25.9
2437 Female, age 94, left hemisphere 24.9
1963 Male, age 80, left hemisphere 21.6
2249 Male, age 74, both hemispheres 20.4
2113 Female, age 91, right hemisphere 20.3
Hippocampus, CA3
nTPM: 27.9
2137 Male, age 80, left hemisphere 40.1
1867 Male, age 76, both hemispheres 31.0
2620 Female, age 94, left hemisphere 29.8
2861 Female, age 67, both hemispheres 25.9
1891 Female, age 85, both hemispheres 22.0
2436 Male, age 74, both hemispheres 18.4
Parahippocampal cortex
nTPM: 21.2
2245 Female, age 91, both hemispheres 25.5
2532 Female, age 72, left hemisphere 23.3
2018 Male, age 76, both hemispheres 23.0
2250 Female, age 67, right hemisphere 22.7
1933 Female, age 85, both hemispheres 21.9
2693 Female, age 94, both hemispheres 21.3
2622 Female, age 67, right hemisphere 20.0
1990 Female, age 91, right hemisphere 19.5
1850 Male, age 80, both hemispheres 17.7
2692 Male, age 74, both hemispheres 17.0
Perirhinal gyrus
nTPM: 20.9
1841 Female, age 85, right hemisphere 23.7
2848 Male, age 76, right hemisphere 21.9
2521 Female, age 94, right hemisphere 20.3
1847 Female, age 91, left hemisphere 19.4
1794 Male, age 80, right hemisphere 19.1
Subiculum
nTPM: 22.1
2042 Male, age 76, both hemispheres 24.8
1901 Male, age 80, both hemispheres 24.2
2438 Female, age 94, left hemisphere 22.8
2729 Female, age 91, right hemisphere 22.4
2619 Male, age 74, both hemispheres 19.3
1977 Female, age 85, both hemispheres 18.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.9
Samples: 197

Max nTPM: 71.9
Min nTPM: 14.0
Std nTPM: 11.2
Median nTPM: 31.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 71.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 67.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 67.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 66.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 60.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 60.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 58.5
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 58.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 58.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 54.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 54.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.7
FF:10153-102I9 76 years, female 24.6
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 16.2
Min nTPM: 10.9
Sample A Female 15.5
Sample B Female 14.7
Sample C Male 16.2
Sample D Male 10.9
Entorhinal cortex
nTPM: 14.7
Samples: 4

Max nTPM: 16.9
Min nTPM: 13.5
Sample A Female 13.5
Sample B Female 16.9
Sample C Male 13.8
Sample D Male 14.6
Subiculum
nTPM: 11.1
Samples: 4

Max nTPM: 13.6
Min nTPM: 8.9
Sample A Female 13.6
Sample B Female 10.6
Sample C Male 8.9
Sample D Male 11.4
Ventral hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 17.4
Min nTPM: 8.4
Sample A Female 8.6
Sample B Female 8.4
Sample C Male 11.7
Sample D Male 17.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 17.9
Min nTPM: 13.8
Sample A Male 15.7
Sample B Male 17.9
Sample C Female 15.4
Sample D Female 13.8
Hippocampal formation
nTPM: 23.4
Samples: 4

Max nTPM: 27.1
Min nTPM: 20.0
Sample A Male 20.0
Sample B Male 23.7
Sample C Female 27.1
Sample D Female 22.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
68301634 Antisense, RP_041130_01_E10, Mouse strain C57BL/6J (56 days, male) 4.2

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