COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:47.0 nTPM
HPA:7.4 nTPM
GTEx:47.0 nTPM
FANTOM5:61.4 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 7.4
overview
Male, age 54 		Colon sample 67
nTPM: 7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 5.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 1.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 6.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 8.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 16.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 5.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 12.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 4.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 8.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 7.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 47.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 47.0
Samples: 373

Max nTPM: 96.5
Min nTPM: 4.0
Std nTPM: 15.4
Median nTPM: 46.3
GTEX-WXYG-1726-SM-4ONCU 50-59 years, female 96.5
GTEX-1N2DV-1826-SM-E6CJ5 40-49 years, male 94.6
GTEX-1LG7Z-1326-SM-DIPF3 30-39 years, male 93.6
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 88.2
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 87.3
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 82.9
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 82.6
GTEX-1B996-2726-SM-7DUGG 60-69 years, male 80.9
GTEX-1MGNQ-2126-SM-EV7AC 40-49 years, male 80.2
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 79.8
GTEX-YFCO-1526-SM-5YYB8 40-49 years, male 79.2
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Colon - Transverse
Average nTPM: 24.3
Samples: 406

Max nTPM: 77.9
Min nTPM: 2.0
Std nTPM: 16.5
Median nTPM: 21.6
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 77.9
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 75.4
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 73.2
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 67.3
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 64.1
GTEX-17F96-2026-SM-79ON4 70-79 years, male 62.8
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 62.4
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 61.8
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 60.7
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 60.1
GTEX-17F9E-1826-SM-7IGMC 50-59 years, male 59.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 61.4
FF:10014-101C5 62,83,84 years, mixed 61.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.