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LMCD1
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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Follicle cells: Not detected
Ovarian stroma cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:65.8 nTPM
HPA:65.8 nTPM
GTEx:59.8 nTPM
FANTOM5:120.5 Scaled Tags Per Million

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA024059
Follicle cells Not detected
Ovarian stroma cells Medium


OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 65.8
overview
Female, age 64
Ovary sample 192
nTPM: 79.7
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 62.6
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 55.1
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5


OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 59.8
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 59.8
Samples: 180

Max nTPM: 208.7
Min nTPM: 18.6
Std nTPM: 26.1
Median nTPM: 55.0
GTEX-1GN1U-2326-SM-9MQK4 50-59 years, female 208.7
GTEX-ZV6S-1426-SM-59HKX 40-49 years, female 171.9
GTEX-R55G-1526-SM-48FER 40-49 years, female 135.3
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 118.1
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 115.2
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 113.8
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 112.2
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 109.5
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 108.0
GTEX-RU72-2226-SM-46MUE 50-59 years, female 103.1
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 101.5
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 98.0
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 97.8
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 97.4
GTEX-S341-0726-SM-4AD5R 40-49 years, female 96.9
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 95.8
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 90.5
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 89.2
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 87.6
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 87.0
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 86.3
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 85.6
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 84.9
GTEX-1399S-2126-SM-5J2MH 30-39 years, female 84.2
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 84.2
GTEX-1LVAN-2726-SM-CNPQG 50-59 years, female 82.9
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 80.0
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 79.5
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 79.1
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 78.8
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 78.7
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 78.5
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 78.5
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 78.4
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 78.2
GTEX-QVJO-3126-SM-COH22 60-69 years, female 77.3
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 76.7
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 76.7
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 76.6
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 76.3
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 75.8
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 75.2
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 75.1
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 75.0
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 74.4
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 74.1
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 73.6
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 72.1
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 71.5
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 71.3
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 70.8
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 70.1
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 70.0
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 69.9
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 69.4
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 68.6
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 68.5
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 67.8
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 67.4
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 67.1
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 66.7
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 66.1
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 66.1
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 65.7
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 64.8
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 64.5
GTEX-P78B-1926-SM-3P616 40-49 years, female 63.9
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 63.6
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 63.5
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 62.9
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 62.8
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 62.4
GTEX-1F88F-2126-SM-9KNUK 60-69 years, female 61.7
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 61.5
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 60.9
GTEX-1GF9X-2426-SM-7SB7W 40-49 years, female 60.8
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 60.2
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 59.4
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 59.2
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 59.2
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 58.5
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 58.1
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 57.7
GTEX-11I78-1926-SM-59878 50-59 years, female 57.6
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 57.5
GTEX-13SLX-2426-SM-664OM 50-59 years, female 55.2
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 55.2
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 55.2
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 55.2
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 55.1
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 54.9
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 54.6
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 54.6
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 54.5
GTEX-WI4N-2526-SM-4OOSE 40-49 years, female 54.3
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 54.3
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 53.7
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 53.5
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 52.3
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 52.2
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 52.0
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 51.9
GTEX-QCQG-1426-SM-48U22 50-59 years, female 51.8
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 51.2
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 51.1
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 51.1
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 50.7
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 50.3
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 50.2
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 50.2
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 49.9
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 49.0
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 48.5
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 48.3
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 48.1
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 48.1
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 47.4
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 47.0
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 46.5
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 46.5
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 46.1
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 45.7
GTEX-14PKV-1226-SM-6871T 20-29 years, female 45.5
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 45.3
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 44.9
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 44.3
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 43.9
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 43.6
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 43.1
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 42.5
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 42.4
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 42.0
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 42.0
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 41.7
GTEX-18D9A-0826-SM-718C1 30-39 years, female 40.6
GTEX-Q734-0726-SM-48TZP 40-49 years, female 40.5
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 40.2
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 39.9
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 39.6
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 39.5
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 39.1
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 39.0
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 38.7
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 38.4
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 38.3
GTEX-14BIN-1426-SM-664NI 50-59 years, female 38.2
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 38.1
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 37.9
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 37.6
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 37.4
GTEX-14JG6-0626-SM-68716 30-39 years, female 37.3
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 37.2
GTEX-145ME-1226-SM-5SIB6 40-49 years, female 37.0
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 36.9
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 36.8
GTEX-13X6H-1026-SM-5SIBE 50-59 years, female 35.8
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 35.2
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 34.8
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 34.6
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 34.6
GTEX-183WM-1926-SM-72D5F 70-79 years, female 34.5
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 33.0
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 32.7
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 32.5
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 31.8
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 31.4
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 31.1
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 31.0
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 30.9
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 29.9
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 29.4
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 25.6
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 24.9
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 24.7
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 22.0
GTEX-S32W-1226-SM-4AD67 50-59 years, female 21.8
GTEX-15EOM-1526-SM-68723 20-29 years, female 20.9
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 20.2
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 19.9
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 18.6
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 120.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 120.5
FF:10020-101D2 47,75,84 years, female 120.5

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