HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.7 nTPM
HPA:19.7 nTPM
GTEx:23.7 nTPM
FANTOM5:20.1 Scaled Tags Per Million
Pig:78.9 nTPM
Mouse:19.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004201Antibody HPA004631
Glial cells HighNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.7
Sample id Sample description nTPM
Hippocampus
nTPM: 18.9
2529 Female, age 94, left hemisphere 20.7
2621 Female, age 67, right hemisphere 20.3
1855 Male, age 76, left hemisphere 18.6
2148 Female, age 91, left hemisphere 18.2
1911 Female, age 85, right hemisphere 18.1
1898 Male, age 80, left hemisphere 17.1
Dentate gyrus
nTPM: 18.6
2530 Female, age 94, left hemisphere 19.3
2531 Female, age 67, both hemispheres 19.2
2246 Female, age 85, both hemispheres 18.8
2010 Male, age 76, both hemispheres 18.6
2528 Male, age 74, both hemispheres 18.3
1927 Female, age 91, both hemispheres 17.5
Entorhinal gyrus
nTPM: 19.0
2613 Female, age 94, left hemisphere 20.9
2764 Male, age 80, right hemisphere 20.6
2686 Male, age 75, right hemisphere 19.5
1787 Male, age 76, left hemisphere 18.5
2117 Female, age 91, right hemisphere 17.5
1938 Female, age 85, left hemisphere 17.4
Hippocampus, CA1
nTPM: 18.4
1873 Female, age 85, both hemispheres 19.3
2749 Male, age 80, left hemisphere 19.1
2527 Male, age 74, both hemispheres 18.2
2045 Male, age 76, both hemispheres 17.9
2082 Female, age 91, right hemisphere 17.5
Hippocampus, CA2
nTPM: 17.6
1963 Male, age 80, left hemisphere 18.5
2249 Male, age 74, both hemispheres 18.2
2437 Female, age 94, left hemisphere 18.0
2113 Female, age 91, right hemisphere 17.4
1892 Male, age 76, both hemispheres 17.1
1940 Female, age 85, left hemisphere 16.3
Hippocampus, CA3
nTPM: 19.5
2620 Female, age 94, left hemisphere 23.4
2861 Female, age 67, both hemispheres 20.6
1891 Female, age 85, both hemispheres 19.2
2436 Male, age 74, both hemispheres 18.7
2137 Male, age 80, left hemisphere 17.8
1867 Male, age 76, both hemispheres 17.5
Parahippocampal cortex
nTPM: 19.2
2532 Female, age 72, left hemisphere 22.4
2622 Female, age 67, right hemisphere 21.5
2692 Male, age 74, both hemispheres 21.3
2245 Female, age 91, both hemispheres 20.1
2018 Male, age 76, both hemispheres 18.3
2693 Female, age 94, both hemispheres 18.1
1990 Female, age 91, right hemisphere 18.0
2250 Female, age 67, right hemisphere 17.9
1850 Male, age 80, both hemispheres 17.8
1933 Female, age 85, both hemispheres 16.6
Perirhinal gyrus
nTPM: 16.9
2848 Male, age 76, right hemisphere 17.5
2521 Female, age 94, right hemisphere 17.1
1794 Male, age 80, right hemisphere 16.9
1841 Female, age 85, right hemisphere 16.8
1847 Female, age 91, left hemisphere 16.1
Subiculum
nTPM: 19.7
2042 Male, age 76, both hemispheres 21.6
2438 Female, age 94, left hemisphere 21.1
2619 Male, age 74, both hemispheres 21.0
1901 Male, age 80, both hemispheres 19.1
1977 Female, age 85, both hemispheres 18.1
2729 Female, age 91, right hemisphere 17.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.7
Samples: 197

Max nTPM: 44.7
Min nTPM: 8.4
Std nTPM: 6.0
Median nTPM: 22.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 44.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 44.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 43.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 41.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 38.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 36.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 36.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 36.6
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 34.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 34.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 33.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.1
FF:10153-102I9 76 years, female 22.5
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 78.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 76.9
Samples: 4

Max nTPM: 87.2
Min nTPM: 65.1
Sample A Female 78.3
Sample B Female 77.0
Sample C Male 87.2
Sample D Male 65.1
Entorhinal cortex
nTPM: 63.6
Samples: 4

Max nTPM: 74.4
Min nTPM: 55.2
Sample A Female 61.9
Sample B Female 74.4
Sample C Male 62.9
Sample D Male 55.2
Subiculum
nTPM: 74.6
Samples: 4

Max nTPM: 81.3
Min nTPM: 61.2
Sample A Female 79.5
Sample B Female 81.3
Sample C Male 76.3
Sample D Male 61.2
Ventral hippocampus
nTPM: 78.9
Samples: 4

Max nTPM: 94.8
Min nTPM: 70.5
Sample A Female 73.7
Sample B Female 76.6
Sample C Male 94.8
Sample D Male 70.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 20.5
Min nTPM: 19.2
Sample A Male 19.3
Sample B Male 20.5
Sample C Female 20.2
Sample D Female 19.2
Hippocampal formation
nTPM: 18.9
Samples: 4

Max nTPM: 23.0
Min nTPM: 16.1
Sample A Male 18.4
Sample B Male 23.0
Sample C Female 16.1
Sample D Female 18.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
324 Antisense, RP_Baylor_103272, Mouse strain C57BL/6J (56 days, male) 0.0
325 Sense, RPS_Baylor_37097, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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