COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: High
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:67.9 nTPM
HPA:33.4 nTPM
GTEx:67.9 nTPM
FANTOM5:48.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA003585
Endothelial cells High
Glandular cells High
Peripheral nerve/ganglion High

COLON - HPA RNA-seqi
Average nTPM 33.4
overview
Male, age 54 		Colon sample 67
nTPM: 36.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 30.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 28.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 32.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 35.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 38.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 38.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 30.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 31.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 33.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 27.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 34
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 36.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 67.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 67.9
Samples: 373

Max nTPM: 133.3
Min nTPM: 28.3
Std nTPM: 16.8
Median nTPM: 66.4
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 133.3
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 125.1
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 118.8
GTEX-183WM-2526-SM-731BP 70-79 years, female 117.6
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 116.9
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 114.0
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 113.7
GTEX-1GZ4H-1326-SM-7P8TE 50-59 years, female 112.5
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 109.5
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 109.0
GTEX-17F9Y-2626-SM-7IGN9 70-79 years, female 105.5
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Colon - Transverse
Average nTPM: 52.9
Samples: 406

Max nTPM: 98.2
Min nTPM: 28.8
Std nTPM: 12.9
Median nTPM: 49.9
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 98.2
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 95.6
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 94.7
GTEX-14E1K-1826-SM-793DT 50-59 years, male 94.3
GTEX-1IDJD-2226-SM-A96TD 30-39 years, male 94.3
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 92.2
GTEX-15UF6-2626-SM-6M466 70-79 years, female 89.9
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 89.5
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 88.0
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 86.6
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 85.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 48.8
FF:10014-101C5 62,83,84 years, mixed 48.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.