HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:59.7 nTPM
HPA:59.7 nTPM
GTEx:59.7 nTPM
FANTOM5:65.5 Scaled Tags Per Million
Pig:114.4 nTPM
Mouse:160.4 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035640Antibody CAB037313
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.7
Sample id Sample description nTPM
Hippocampus
nTPM: 50.3
1898 Male, age 80, left hemisphere 56.1
2148 Female, age 91, left hemisphere 53.2
2621 Female, age 67, right hemisphere 51.4
1855 Male, age 76, left hemisphere 50.2
2529 Female, age 94, left hemisphere 47.9
1911 Female, age 85, right hemisphere 42.8
Dentate gyrus
nTPM: 52.4
1927 Female, age 91, both hemispheres 61.9
2530 Female, age 94, left hemisphere 53.3
2531 Female, age 67, both hemispheres 51.2
2528 Male, age 74, both hemispheres 50.1
2246 Female, age 85, both hemispheres 49.0
2010 Male, age 76, both hemispheres 48.9
Entorhinal gyrus
nTPM: 49.0
2613 Female, age 94, left hemisphere 54.8
2764 Male, age 80, right hemisphere 53.4
1787 Male, age 76, left hemisphere 51.6
1938 Female, age 85, left hemisphere 51.5
2117 Female, age 91, right hemisphere 41.6
2686 Male, age 75, right hemisphere 41.3
Hippocampus, CA1
nTPM: 59.7
2749 Male, age 80, left hemisphere 91.9
1873 Female, age 85, both hemispheres 56.9
2527 Male, age 74, both hemispheres 55.2
2045 Male, age 76, both hemispheres 53.1
2082 Female, age 91, right hemisphere 41.6
Hippocampus, CA2
nTPM: 48.3
1963 Male, age 80, left hemisphere 60.4
1892 Male, age 76, both hemispheres 55.2
2437 Female, age 94, left hemisphere 46.6
2249 Male, age 74, both hemispheres 43.1
1940 Female, age 85, left hemisphere 42.6
2113 Female, age 91, right hemisphere 41.9
Hippocampus, CA3
nTPM: 54.2
2137 Male, age 80, left hemisphere 76.8
2620 Female, age 94, left hemisphere 65.4
2861 Female, age 67, both hemispheres 52.4
1867 Male, age 76, both hemispheres 46.7
2436 Male, age 74, both hemispheres 42.9
1891 Female, age 85, both hemispheres 41.1
Parahippocampal cortex
nTPM: 47.0
2245 Female, age 91, both hemispheres 53.9
1990 Female, age 91, right hemisphere 53.5
2250 Female, age 67, right hemisphere 52.8
1850 Male, age 80, both hemispheres 51.3
1933 Female, age 85, both hemispheres 50.3
2532 Female, age 72, left hemisphere 43.7
2622 Female, age 67, right hemisphere 43.3
2693 Female, age 94, both hemispheres 42.9
2018 Male, age 76, both hemispheres 39.1
2692 Male, age 74, both hemispheres 38.9
Perirhinal gyrus
nTPM: 59.5
1847 Female, age 91, left hemisphere 77.1
2521 Female, age 94, right hemisphere 62.1
1794 Male, age 80, right hemisphere 57.9
1841 Female, age 85, right hemisphere 54.4
2848 Male, age 76, right hemisphere 46.0
Subiculum
nTPM: 44.2
1977 Female, age 85, both hemispheres 51.7
1901 Male, age 80, both hemispheres 48.1
2619 Male, age 74, both hemispheres 47.1
2729 Female, age 91, right hemisphere 43.0
2438 Female, age 94, left hemisphere 40.3
2042 Male, age 76, both hemispheres 34.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.7
Samples: 197

Max nTPM: 174.5
Min nTPM: 9.0
Std nTPM: 31.7
Median nTPM: 55.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 174.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 158.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 142.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 139.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 138.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 131.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 127.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 124.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 122.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 120.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 119.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.5
FF:10169-103B7 60 years, female 72.1
FF:10153-102I9 76 years, female 58.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 114.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 114.4
Samples: 4

Max nTPM: 141.5
Min nTPM: 83.5
Sample A Female 141.5
Sample B Female 135.0
Sample C Male 83.5
Sample D Male 97.5
Entorhinal cortex
nTPM: 106.6
Samples: 4

Max nTPM: 119.6
Min nTPM: 89.2
Sample A Female 118.2
Sample B Female 89.2
Sample C Male 119.6
Sample D Male 99.2
Subiculum
nTPM: 111.1
Samples: 4

Max nTPM: 132.1
Min nTPM: 94.2
Sample A Female 132.1
Sample B Female 94.2
Sample C Male 111.8
Sample D Male 106.1
Ventral hippocampus
nTPM: 114.2
Samples: 4

Max nTPM: 144.3
Min nTPM: 72.6
Sample A Female 108.4
Sample B Female 72.6
Sample C Male 144.3
Sample D Male 131.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 160.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 127.4
Samples: 4

Max nTPM: 154.8
Min nTPM: 111.8
Sample A Male 111.8
Sample B Male 118.9
Sample C Female 124.1
Sample D Female 154.8
Hippocampal formation
nTPM: 160.4
Samples: 4

Max nTPM: 177.2
Min nTPM: 144.8
Sample A Male 147.4
Sample B Male 172.2
Sample C Female 177.2
Sample D Female 144.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
73512561 Antisense, RP_050921_01_B04, Mouse strain C57BL/6J (56 days, male) 6.8

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