COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:67.6 nTPM
HPA:15.2 nTPM
GTEx:67.6 nTPM
FANTOM5:56.6 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA008704
Endothelial cells Medium
Glandular cells High
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPM 15.2
overview
Male, age 54 		Colon sample 67
nTPM: 11.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 10.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 4.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 15.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 14.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 32.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 12.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 7.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 27.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 7.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 16
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 19.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 18.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 67.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 67.6
Samples: 373

Max nTPM: 123.7
Min nTPM: 6.1
Std nTPM: 19.6
Median nTPM: 69.4
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 123.7
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 116.5
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 109.9
GTEX-1IDJI-2226-SM-CKZPM 50-59 years, female 109.0
GTEX-1IDJH-2826-SM-CJI49 70-79 years, male 107.3
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 106.3
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 102.3
GTEX-1OFPY-1226-SM-E76OM 60-69 years, male 100.4
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 99.7
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 98.5
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 98.5
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Colon - Transverse
Average nTPM: 34.8
Samples: 406

Max nTPM: 124.9
Min nTPM: 3.4
Std nTPM: 24.6
Median nTPM: 30.7
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 124.9
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 121.3
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 95.3
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 94.0
GTEX-1RAZQ-2126-SM-DTX9V 30-39 years, male 92.3
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 92.0
GTEX-1LBAC-1626-SM-CXZKV 20-29 years, male 91.6
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 89.1
GTEX-11GSP-1626-SM-5986N 60-69 years, female 88.7
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 86.7
GTEX-17F9E-1826-SM-7IGMC 50-59 years, male 86.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 56.6
FF:10014-101C5 62,83,84 years, mixed 56.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.