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PICALM
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  • PICALM
PROTEIN STRUCTURE
ANTIBODIES
AND
VALIDATION
Protein structures
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PICALM
Synonyms CALM, CLTH
Gene descriptioni

Full gene name according to HGNC.

Phosphatidylinositol binding clathrin assembly protein
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Read more
Cancer-related genes
Disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Read more
Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband q14.2
Chromosome location (bp) 85957175 - 86069882
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

15
Ensembl ENSG00000073921 (version 103.38)
Entrez gene 8301
HGNC HGNC:15514
UniProt Q13492 (UniProt - Evidence at protein level)
neXtProt NX_Q13492
Antibodypedia PICALM antibodies


PROTEIN STRUCTUREi

The Structure section provides predicted structures from the Alphafold protein structure database and available experimental structures from Protein Data Bank (PDB).

In the Structure drop-down menu all experimental structures from PDB are available for selection and display. The structures are displayed using the NGL Viewer and can be zoomed-in and rotated either manually or by checking the Autorotate box. The Color scheme can be selected to show the residue index, chain name or confidence score (as B-factors and pLDDT score for experimental and predicted structures, respectively). The positions for available antigen sequences in the structure are shown if Antigens is turned to ON, and the Variants slider can be used to show the positions of clinical and population variants.https://github.com/nglviewer/ngl

Read more

Predicted


Description: Structure prediction from Alphafold project. Structure version 2

# Chains: 1      # Clinical variants: 0      # Population variants: 320

Antigens:

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On

Variants:

Off
Clinical
Population

Color scheme:

Confidence
Residue index
Chain name

Autorotate:

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On



PROTEIN BROWSERi

The protein browser displays the antigen location on the target protein(s) and the features of the target protein. The tabs at the top of the protein view section can be used to switch between the different splice variants to which an antigen has been mapped.

At the top of the view, the position of the antigen (identified by the corresponding HPA identifier) is shown as a green bar. A yellow triangle on the bar indicates a <100% sequence identity to the protein target.

Below the antigens, the maximum percent sequence identity of the protein to all other proteins from other human genes is displayed, using a sliding window of 10 aa residues (HsID 10) or 50 aa residues (HsID 50). The region with the lowest possible identity is always selected for antigen design, with a maximum identity of 60% allowed for designing a single-target antigen (read more).

The curve in blue displays the predicted antigenicity i.e. the tendency for different regions of the protein to generate an immune response, with peak regions being predicted to be more antigenic.The curve shows average values based on a sliding window approach using an in-house propensity scale. (read more).

If a signal peptide is predicted by a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius (turquoise) and/or transmembrane regions (orange) are predicted by MDM, these are displayed.

Low complexity regions are shown in yellow and InterPro regions in green. Common (purple) and unique (grey) regions between different splice variants of the gene are also displayed (read more), and at the bottom of the protein view is the protein scale.
«
PICALM-201
PICALM-202
PICALM-203
PICALM-204
PICALM-207
PICALM-208
PICALM-209
PICALM-211
PICALM-212
PICALM-213
PICALM-214
PICALM-217
PICALM-219
PICALM-220
PICALM-224
»


PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant UniProt Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PICALM-201
ENSP00000348718
ENST00000356360
Q13492 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000149 [SNARE binding]
GO:0001540 [amyloid-beta binding]
GO:0005515 [protein binding]
GO:0005543 [phospholipid binding]
GO:0005545 [1-phosphatidylinositol binding]
GO:0005546 [phosphatidylinositol-4,5-bisphosphate binding]
GO:0005634 [nucleus]
GO:0005769 [early endosome]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006897 [endocytosis]
GO:0006898 [receptor-mediated endocytosis]
GO:0006900 [vesicle budding from membrane]
GO:0007611 [learning or memory]
GO:0008021 [synaptic vesicle]
GO:0009986 [cell surface]
GO:0010629 [negative regulation of gene expression]
GO:0016020 [membrane]
GO:0016185 [synaptic vesicle budding from presynaptic endocytic zone membrane]
GO:0016188 [synaptic vesicle maturation]
GO:0016192 [vesicle-mediated transport]
GO:0016197 [endosomal transport]
GO:0030100 [regulation of endocytosis]
GO:0030122 [AP-2 adaptor complex]
GO:0030132 [clathrin coat of coated pit]
GO:0030136 [clathrin-coated vesicle]
GO:0030276 [clathrin binding]
GO:0031224 [intrinsic component of membrane]
GO:0031267 [small GTPase binding]
GO:0031410 [cytoplasmic vesicle]
GO:0031623 [receptor internalization]
GO:0031982 [vesicle]
GO:0032050 [clathrin heavy chain binding]
GO:0032880 [regulation of protein localization]
GO:0035459 [vesicle cargo loading]
GO:0042734 [presynaptic membrane]
GO:0043025 [neuronal cell body]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0043547 [positive regulation of GTPase activity]
GO:0045211 [postsynaptic membrane]
GO:0045296 [cadherin binding]
GO:0045334 [clathrin-coated endocytic vesicle]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0048156 [tau protein binding]
GO:0048261 [negative regulation of receptor-mediated endocytosis]
GO:0048268 [clathrin coat assembly]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0055072 [iron ion homeostasis]
GO:0061024 [membrane organization]
GO:0065003 [protein-containing complex assembly]
GO:0070381 [endosome to plasma membrane transport vesicle]
GO:0072583 [clathrin-dependent endocytosis]
GO:0090647 [modulation of age-related behavioral decline]
GO:0097418 [neurofibrillary tangle]
GO:0097494 [regulation of vesicle size]
GO:0097753 [membrane bending]
GO:0098894 [extrinsic component of presynaptic endocytic zone membrane]
GO:0150093 [amyloid-beta clearance by transcytosis]
GO:1901216 [positive regulation of neuron death]
GO:1902004 [positive regulation of amyloid-beta formation]
GO:1902959 [regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1902961 [positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1902963 [negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1903077 [negative regulation of protein localization to plasma membrane]
GO:1905224 [clathrin-coated pit assembly]
GO:2000009 [negative regulation of protein localization to cell surface]
Show all
632 aa
68.8 kDa
No 0
PICALM-202
ENSP00000377015
ENST00000393346
Q13492 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
A0A024R5P1 [Target identity:100%; Query identity:100%]
Phosphatidylinositol binding clathrin assembly protein, isoform CRA_i
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000149 [SNARE binding]
GO:0001540 [amyloid-beta binding]
GO:0005515 [protein binding]
GO:0005543 [phospholipid binding]
GO:0005545 [1-phosphatidylinositol binding]
GO:0005546 [phosphatidylinositol-4,5-bisphosphate binding]
GO:0005634 [nucleus]
GO:0005769 [early endosome]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006897 [endocytosis]
GO:0006898 [receptor-mediated endocytosis]
GO:0006900 [vesicle budding from membrane]
GO:0007409 [axonogenesis]
GO:0007611 [learning or memory]
GO:0008021 [synaptic vesicle]
GO:0009986 [cell surface]
GO:0010629 [negative regulation of gene expression]
GO:0016020 [membrane]
GO:0016185 [synaptic vesicle budding from presynaptic endocytic zone membrane]
GO:0016188 [synaptic vesicle maturation]
GO:0016192 [vesicle-mediated transport]
GO:0016197 [endosomal transport]
GO:0030097 [hemopoiesis]
GO:0030100 [regulation of endocytosis]
GO:0030122 [AP-2 adaptor complex]
GO:0030132 [clathrin coat of coated pit]
GO:0030136 [clathrin-coated vesicle]
GO:0030276 [clathrin binding]
GO:0031224 [intrinsic component of membrane]
GO:0031267 [small GTPase binding]
GO:0031410 [cytoplasmic vesicle]
GO:0031623 [receptor internalization]
GO:0031982 [vesicle]
GO:0032050 [clathrin heavy chain binding]
GO:0032880 [regulation of protein localization]
GO:0035459 [vesicle cargo loading]
GO:0042734 [presynaptic membrane]
GO:0043025 [neuronal cell body]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0043547 [positive regulation of GTPase activity]
GO:0045211 [postsynaptic membrane]
GO:0045296 [cadherin binding]
GO:0045334 [clathrin-coated endocytic vesicle]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0048156 [tau protein binding]
GO:0048261 [negative regulation of receptor-mediated endocytosis]
GO:0048268 [clathrin coat assembly]
GO:0048471 [perinuclear region of cytoplasm]
GO:0048813 [dendrite morphogenesis]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0055072 [iron ion homeostasis]
GO:0061024 [membrane organization]
GO:0065003 [protein-containing complex assembly]
GO:0070381 [endosome to plasma membrane transport vesicle]
GO:0072583 [clathrin-dependent endocytosis]
GO:0090647 [modulation of age-related behavioral decline]
GO:0097418 [neurofibrillary tangle]
GO:0097494 [regulation of vesicle size]
GO:0097753 [membrane bending]
GO:0098894 [extrinsic component of presynaptic endocytic zone membrane]
GO:0150093 [amyloid-beta clearance by transcytosis]
GO:1901216 [positive regulation of neuron death]
GO:1902004 [positive regulation of amyloid-beta formation]
GO:1902959 [regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1902961 [positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1902963 [negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1903077 [negative regulation of protein localization to plasma membrane]
GO:1905224 [clathrin-coated pit assembly]
GO:2000009 [negative regulation of protein localization to cell surface]
Show all
652 aa
70.8 kDa
No 0
PICALM-203
ENSP00000436508
ENST00000525162
E9PI56 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005543 [phospholipid binding]
GO:0005545 [1-phosphatidylinositol binding]
GO:0006897 [endocytosis]
GO:0030136 [clathrin-coated vesicle]
GO:0030276 [clathrin binding]
GO:0048268 [clathrin coat assembly]
Show all
147 aa
16.9 kDa
No 0
PICALM-204
ENSP00000433846
ENST00000526033
Q13492 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000149 [SNARE binding]
GO:0001540 [amyloid-beta binding]
GO:0005515 [protein binding]
GO:0005543 [phospholipid binding]
GO:0005545 [1-phosphatidylinositol binding]
GO:0005546 [phosphatidylinositol-4,5-bisphosphate binding]
GO:0005634 [nucleus]
GO:0005769 [early endosome]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006897 [endocytosis]
GO:0006898 [receptor-mediated endocytosis]
GO:0006900 [vesicle budding from membrane]
GO:0007611 [learning or memory]
GO:0008021 [synaptic vesicle]
GO:0009986 [cell surface]
GO:0010629 [negative regulation of gene expression]
GO:0016020 [membrane]
GO:0016185 [synaptic vesicle budding from presynaptic endocytic zone membrane]
GO:0016188 [synaptic vesicle maturation]
GO:0016192 [vesicle-mediated transport]
GO:0016197 [endosomal transport]
GO:0030100 [regulation of endocytosis]
GO:0030122 [AP-2 adaptor complex]
GO:0030132 [clathrin coat of coated pit]
GO:0030136 [clathrin-coated vesicle]
GO:0030276 [clathrin binding]
GO:0031224 [intrinsic component of membrane]
GO:0031267 [small GTPase binding]
GO:0031410 [cytoplasmic vesicle]
GO:0031623 [receptor internalization]
GO:0031982 [vesicle]
GO:0032050 [clathrin heavy chain binding]
GO:0032880 [regulation of protein localization]
GO:0035459 [vesicle cargo loading]
GO:0042734 [presynaptic membrane]
GO:0043025 [neuronal cell body]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0043547 [positive regulation of GTPase activity]
GO:0045211 [postsynaptic membrane]
GO:0045296 [cadherin binding]
GO:0045334 [clathrin-coated endocytic vesicle]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0048156 [tau protein binding]
GO:0048261 [negative regulation of receptor-mediated endocytosis]
GO:0048268 [clathrin coat assembly]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0055072 [iron ion homeostasis]
GO:0061024 [membrane organization]
GO:0065003 [protein-containing complex assembly]
GO:0070381 [endosome to plasma membrane transport vesicle]
GO:0072583 [clathrin-dependent endocytosis]
GO:0090647 [modulation of age-related behavioral decline]
GO:0097418 [neurofibrillary tangle]
GO:0097494 [regulation of vesicle size]
GO:0097753 [membrane bending]
GO:0098894 [extrinsic component of presynaptic endocytic zone membrane]
GO:0150093 [amyloid-beta clearance by transcytosis]
GO:1901216 [positive regulation of neuron death]
GO:1902004 [positive regulation of amyloid-beta formation]
GO:1902959 [regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1902961 [positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1902963 [negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1903077 [negative regulation of protein localization to plasma membrane]
GO:1905224 [clathrin-coated pit assembly]
GO:2000009 [negative regulation of protein localization to cell surface]
Show all
645 aa
70 kDa
No 0
PICALM-207
ENSP00000432976
ENST00000526961
H0YD48 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005545 [1-phosphatidylinositol binding]
GO:0006897 [endocytosis]
GO:0030136 [clathrin-coated vesicle]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0048268 [clathrin coat assembly]
Show all
264 aa
27.7 kDa
No 0
PICALM-208
ENSP00000431545
ENST00000528256
E9PKP6 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005543 [phospholipid binding]
GO:0005545 [1-phosphatidylinositol binding]
GO:0006897 [endocytosis]
GO:0030136 [clathrin-coated vesicle]
GO:0030276 [clathrin binding]
GO:0048268 [clathrin coat assembly]
Show all
148 aa
17.3 kDa
No 0
PICALM-209
ENSP00000434884
ENST00000528398
Q13492 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000149 [SNARE binding]
GO:0001540 [amyloid-beta binding]
GO:0005515 [protein binding]
GO:0005543 [phospholipid binding]
GO:0005545 [1-phosphatidylinositol binding]
GO:0005546 [phosphatidylinositol-4,5-bisphosphate binding]
GO:0005634 [nucleus]
GO:0005769 [early endosome]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006897 [endocytosis]
GO:0006898 [receptor-mediated endocytosis]
GO:0006900 [vesicle budding from membrane]
GO:0007611 [learning or memory]
GO:0008021 [synaptic vesicle]
GO:0009986 [cell surface]
GO:0010629 [negative regulation of gene expression]
GO:0016020 [membrane]
GO:0016185 [synaptic vesicle budding from presynaptic endocytic zone membrane]
GO:0016188 [synaptic vesicle maturation]
GO:0016192 [vesicle-mediated transport]
GO:0016197 [endosomal transport]
GO:0030100 [regulation of endocytosis]
GO:0030122 [AP-2 adaptor complex]
GO:0030132 [clathrin coat of coated pit]
GO:0030136 [clathrin-coated vesicle]
GO:0030276 [clathrin binding]
GO:0031224 [intrinsic component of membrane]
GO:0031267 [small GTPase binding]
GO:0031410 [cytoplasmic vesicle]
GO:0031623 [receptor internalization]
GO:0031982 [vesicle]
GO:0032050 [clathrin heavy chain binding]
GO:0032880 [regulation of protein localization]
GO:0035459 [vesicle cargo loading]
GO:0042734 [presynaptic membrane]
GO:0043025 [neuronal cell body]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0043547 [positive regulation of GTPase activity]
GO:0045211 [postsynaptic membrane]
GO:0045296 [cadherin binding]
GO:0045334 [clathrin-coated endocytic vesicle]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0048156 [tau protein binding]
GO:0048261 [negative regulation of receptor-mediated endocytosis]
GO:0048268 [clathrin coat assembly]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0055072 [iron ion homeostasis]
GO:0061024 [membrane organization]
GO:0065003 [protein-containing complex assembly]
GO:0070381 [endosome to plasma membrane transport vesicle]
GO:0072583 [clathrin-dependent endocytosis]
GO:0090647 [modulation of age-related behavioral decline]
GO:0097418 [neurofibrillary tangle]
GO:0097494 [regulation of vesicle size]
GO:0097753 [membrane bending]
GO:0098894 [extrinsic component of presynaptic endocytic zone membrane]
GO:0150093 [amyloid-beta clearance by transcytosis]
GO:1901216 [positive regulation of neuron death]
GO:1902004 [positive regulation of amyloid-beta formation]
GO:1902959 [regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1902961 [positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1902963 [negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1903077 [negative regulation of protein localization to plasma membrane]
GO:1905224 [clathrin-coated pit assembly]
GO:2000009 [negative regulation of protein localization to cell surface]
Show all
551 aa
59.9 kDa
No 0
PICALM-211
ENSP00000432509
ENST00000529016
H0YCY1 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005545 [1-phosphatidylinositol binding]
GO:0006897 [endocytosis]
GO:0030136 [clathrin-coated vesicle]
GO:0048268 [clathrin coat assembly]
Show all
244 aa
25.4 kDa
No 0
PICALM-212
ENSP00000435807
ENST00000529760
H0YEH1 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005545 [1-phosphatidylinositol binding]
GO:0006897 [endocytosis]
GO:0030136 [clathrin-coated vesicle]
GO:0048268 [clathrin coat assembly]
Show all
308 aa
32.1 kDa
No 0
PICALM-213
ENSP00000435737
ENST00000530542
H0YEF7 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
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Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005545 [1-phosphatidylinositol binding]
GO:0006897 [endocytosis]
GO:0030136 [clathrin-coated vesicle]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0048268 [clathrin coat assembly]
Show all
302 aa
31.4 kDa
No 0
PICALM-214
ENSP00000436852
ENST00000530692
H0YEY8 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005545 [1-phosphatidylinositol binding]
GO:0006897 [endocytosis]
GO:0030136 [clathrin-coated vesicle]
GO:0048268 [clathrin coat assembly]
Show all
215 aa
22.3 kDa
No 0
PICALM-217
ENSP00000433303
ENST00000531930
E9PLJ8 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
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   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005543 [phospholipid binding]
GO:0005545 [1-phosphatidylinositol binding]
GO:0006897 [endocytosis]
GO:0030136 [clathrin-coated vesicle]
GO:0030276 [clathrin binding]
GO:0048268 [clathrin coat assembly]
Show all
185 aa
21.3 kDa
No 0
PICALM-219
ENSP00000436958
ENST00000532317
Q13492 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
A0A024R5L7 [Target identity:100%; Query identity:100%]
Phosphatidylinositol binding clathrin assembly protein, isoform CRA_c
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000149 [SNARE binding]
GO:0001540 [amyloid-beta binding]
GO:0005515 [protein binding]
GO:0005543 [phospholipid binding]
GO:0005545 [1-phosphatidylinositol binding]
GO:0005546 [phosphatidylinositol-4,5-bisphosphate binding]
GO:0005634 [nucleus]
GO:0005769 [early endosome]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006897 [endocytosis]
GO:0006898 [receptor-mediated endocytosis]
GO:0006900 [vesicle budding from membrane]
GO:0007611 [learning or memory]
GO:0008021 [synaptic vesicle]
GO:0009986 [cell surface]
GO:0010629 [negative regulation of gene expression]
GO:0016020 [membrane]
GO:0016185 [synaptic vesicle budding from presynaptic endocytic zone membrane]
GO:0016188 [synaptic vesicle maturation]
GO:0016192 [vesicle-mediated transport]
GO:0016197 [endosomal transport]
GO:0030100 [regulation of endocytosis]
GO:0030122 [AP-2 adaptor complex]
GO:0030132 [clathrin coat of coated pit]
GO:0030136 [clathrin-coated vesicle]
GO:0030276 [clathrin binding]
GO:0031224 [intrinsic component of membrane]
GO:0031267 [small GTPase binding]
GO:0031410 [cytoplasmic vesicle]
GO:0031623 [receptor internalization]
GO:0031982 [vesicle]
GO:0032050 [clathrin heavy chain binding]
GO:0032880 [regulation of protein localization]
GO:0035459 [vesicle cargo loading]
GO:0042734 [presynaptic membrane]
GO:0043025 [neuronal cell body]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0043547 [positive regulation of GTPase activity]
GO:0045211 [postsynaptic membrane]
GO:0045296 [cadherin binding]
GO:0045334 [clathrin-coated endocytic vesicle]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0048156 [tau protein binding]
GO:0048261 [negative regulation of receptor-mediated endocytosis]
GO:0048268 [clathrin coat assembly]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0055072 [iron ion homeostasis]
GO:0061024 [membrane organization]
GO:0065003 [protein-containing complex assembly]
GO:0070381 [endosome to plasma membrane transport vesicle]
GO:0072583 [clathrin-dependent endocytosis]
GO:0090647 [modulation of age-related behavioral decline]
GO:0097418 [neurofibrillary tangle]
GO:0097494 [regulation of vesicle size]
GO:0097753 [membrane bending]
GO:0098894 [extrinsic component of presynaptic endocytic zone membrane]
GO:0150093 [amyloid-beta clearance by transcytosis]
GO:1901216 [positive regulation of neuron death]
GO:1902004 [positive regulation of amyloid-beta formation]
GO:1902959 [regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1902961 [positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1902963 [negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process]
GO:1903077 [negative regulation of protein localization to plasma membrane]
GO:1905224 [clathrin-coated pit assembly]
GO:2000009 [negative regulation of protein localization to cell surface]
Show all
610 aa
66.4 kDa
No 0
PICALM-220
ENSP00000435311
ENST00000532603
H0YE97 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005545 [1-phosphatidylinositol binding]
GO:0006897 [endocytosis]
GO:0030136 [clathrin-coated vesicle]
GO:0048268 [clathrin coat assembly]
Show all
134 aa
13.9 kDa
No 0
PICALM-224
ENSP00000487119
ENST00000630913
E9PK13 [Direct mapping]
Phosphatidylinositol-binding clathrin assembly protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005543 [phospholipid binding]
GO:0005545 [1-phosphatidylinositol binding]
GO:0006897 [endocytosis]
GO:0030136 [clathrin-coated vesicle]
GO:0048268 [clathrin coat assembly]
Show all
105 aa
11.6 kDa
No 0

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