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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA039370
Pigment epithelial cells
Not detected
Photoreceptor cells
Medium
Limiting membrane
Not detected
Outer plexiform layer
Low
Inner nuclear layer
Not detected
Inner plexiform layer
Low
Ganglion cells
Not detected
Nerve fiber layer
Low
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 321.3
Min nTPM: 59.5
Std nTPM: 53.7
Median nTPM: 0.0
415_1
77 years, female
321.3
352_1
62 years, male
300.3
386_1
76 years, male
288.4
466_1
57 years, female
281.7
229_1
69 years, female
281.0
9_1
66 years, female
277.8
172_1
72 years, female
277.4
162_1
79 years, female
267.9
6_1
73 years, female
267.3
126_1
63 years, male
265.1
414_1
84 years, female
261.7
246_1
77 years, male
256.0
32_1
67 years, male
254.3
324_1
76 years, male
253.2
251_1
78 years, male
252.9
490_1
67 years, female
250.2
468_1
89 years, male
247.9
425_1
59 years, female
247.1
149_1
88 years, male
246.2
43_1
64 years, female
243.9
265_1
87 years, male
243.4
142_1
61 years, female
241.2
286_1
68 years, female
238.6
526_1
61 years, male
237.6
480_1
63 years, male
235.6
115_1
83 years, male
234.8
389_1
86 years, female
234.1
81_1
67 years, male
233.0
316_1
62 years, male
230.9
292_1
71 years, male
230.1
217_1
76 years, male
228.9
177_1
74 years, male
223.6
153_1
70 years, female
222.5
413_1
59 years, female
221.9
354_1
81 years, female
220.5
376_1
75 years, female
220.2
189_1
76 years, male
217.1
355_1
70 years, female
214.8
377_1
82 years, female
212.6
499_1
55 years, female
212.4
396_1
62 years, male
210.8
375_1
74 years, female
210.3
243_1
75 years, male
208.7
266_1
85 years, male
208.4
315_1
62 years, female
205.9
405_1
91 years, male
204.7
319_1
81 years, male
203.7
394_1
75 years, female
203.2
503_1
68 years, male
201.4
447_1
81 years, male
201.1
163_1
78 years, male
198.8
18_1
88 years, male
198.7
117_1
61 years, male
196.1
349_1
83 years, male
195.0
404_1
82 years, female
193.6
35_1
74 years, female
190.3
335_1
73 years, female
190.2
491_1
89 years, female
189.9
518_1
75 years, female
188.2
379_1
60 years, male
187.4
254_1
77 years, female
186.3
348_1
84 years, male
184.3
313_1
79 years, female
183.4
237_1
82 years, male
182.2
350_1
84 years, female
180.8
356_1
87 years, female
179.2
321_1
62 years, female
177.1
406_1
79 years, male
176.3
517_1
88 years, male
174.7
353_1
82 years, female
172.0
347_1
72 years, male
168.5
291_1
76 years, male
168.3
384_1
83 years, male
167.6
17_1
71 years, male
162.5
89_1
63 years, male
162.1
264_1
73 years, female
160.6
320_1
89 years, female
160.2
318_1
68 years, male
158.3
288_1
66 years, female
155.3
307_1
66 years, female
153.4
99_1
64 years, male
152.0
293_1
68 years, female
151.2
2_1
77 years, female
149.3
109_1
81 years, female
146.4
137_1
83 years, male
142.4
145_1
84 years, male
142.1
120_1
70 years, female
141.6
311_1
78 years, male
141.1
139_1
64 years, female
136.5
218_1
71 years, female
130.2
4_1
88 years, female
129.6
351_1
91 years, male
128.1
501_1
88 years, male
126.3
42_1
85 years, male
124.5
322_1
76 years, male
121.6
119_1
70 years, female
118.9
314_1
67 years, male
115.5
173_1
67 years, male
111.0
317_1
60 years, male
102.3
295_1
61 years, female
99.9
506_1
65 years, male
97.4
495_1
57 years, female
95.0
452_1
88 years, female
87.5
308_1
70 years, female
67.8
41_1
94 years, female
59.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.