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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:783.1 nTPM
FANTOM5:681.1 Scaled Tags Per Million
Pig:193.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB018614Antibody CAB069394Antibody CAB080034
Glial cells MediumNot detectedHigh
Neuronal cells LowLowLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 783.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 783.1
Samples: 246

Max nTPM: 1733.2
Min nTPM: 330.4
Std nTPM: 200.6
Median nTPM: 747.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1733.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1660.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1315.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1268.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1255.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1239.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1194.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1186.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1185.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1156.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1154.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1149.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1148.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1140.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1134.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1127.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1123.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1117.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1113.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1105.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1080.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1065.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1056.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1055.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1042.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1040.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1022.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1014.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1003.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1002.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1002.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1000.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 998.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 989.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 989.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 971.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 971.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 966.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 966.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 962.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 962.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 962.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 960.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 954.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 951.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 948.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 947.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 943.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 942.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 941.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 932.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 931.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 929.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 924.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 924.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 917.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 913.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 909.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 905.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 896.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 892.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 891.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 888.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 884.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 879.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 877.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 877.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 864.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 861.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 859.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 855.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 850.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 847.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 845.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 844.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 842.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 837.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 837.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 837.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 836.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 834.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 827.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 825.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 824.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 823.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 821.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 821.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 819.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 817.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 816.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 810.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 809.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 808.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 806.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 805.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 805.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 801.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 797.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 797.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 797.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 796.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 792.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 788.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 785.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 780.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 779.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 775.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 775.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 774.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 773.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 770.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 770.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 767.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 762.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 757.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 757.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 755.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 753.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 753.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 750.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 748.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 748.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 747.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 746.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 744.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 743.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 739.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 737.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 736.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 733.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 732.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 729.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 728.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 728.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 727.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 727.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 726.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 726.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 724.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 723.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 720.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 720.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 719.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 718.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 718.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 718.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 718.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 716.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 716.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 714.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 714.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 713.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 712.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 710.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 710.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 707.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 706.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 705.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 704.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 701.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 700.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 699.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 696.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 695.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 694.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 689.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 689.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 688.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 687.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 687.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 686.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 686.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 674.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 672.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 668.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 668.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 667.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 667.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 667.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 661.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 660.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 660.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 658.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 654.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 654.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 653.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 649.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 649.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 648.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 645.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 643.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 643.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 642.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 636.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 635.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 633.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 631.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 628.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 625.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 624.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 624.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 623.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 623.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 620.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 619.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 619.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 618.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 617.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 612.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 612.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 610.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 604.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 598.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 597.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 590.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 589.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 583.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 582.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 578.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 578.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 578.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 573.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 548.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 548.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 547.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 547.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 546.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 543.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 535.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 532.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 523.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 522.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 521.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 517.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 511.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 508.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 481.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 453.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 441.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 438.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 431.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 420.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 398.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 388.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 330.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 330.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 681.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 681.1
FF:10164-103B2 76 years, female 681.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 193.2
Pig sample Sample description nTPM
Caudate
nTPM: 193.2
Samples: 4

Max nTPM: 245.7
Min nTPM: 156.1
Sample A Female 156.1
Sample B Female 201.9
Sample C Male 245.7
Sample D Male 169.0

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