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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM EPIDIDYMIS
ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:196.5 nTPM
FANTOM5:221.9 Scaled Tags Per Million
Pig:44.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA019004Antibody HPA073666
Glial cells MediumHigh
Neuronal cells LowHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 196.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 196.5
Samples: 246

Max nTPM: 396.1
Min nTPM: 79.1
Std nTPM: 50.3
Median nTPM: 187.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 396.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 367.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 338.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 332.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 330.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 318.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 311.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 309.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 307.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 305.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 305.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 304.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 299.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 290.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 289.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 289.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 285.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 284.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 283.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 276.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 271.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 267.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 267.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 266.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 265.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 265.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 264.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 256.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 255.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 249.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 247.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 245.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 244.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 244.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 244.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 243.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 243.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 243.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 242.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 242.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 241.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 241.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 238.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 237.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 237.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 234.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 234.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 233.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 232.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 231.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 231.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 230.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 229.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 228.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 227.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 226.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 224.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 222.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 222.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 222.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 221.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 220.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 220.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 219.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 218.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 218.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 218.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 217.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 217.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 216.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 215.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 215.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 214.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 214.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 214.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 213.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 213.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 211.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 211.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 211.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 211.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 211.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 209.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 209.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 208.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 208.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 207.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 206.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 206.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 206.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 206.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 206.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 203.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 202.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 202.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 202.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 201.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 201.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 200.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 200.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 200.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 199.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 198.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 198.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 198.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 198.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 198.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 198.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 197.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 197.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 196.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 194.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 193.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 193.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 193.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 192.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 192.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 192.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 191.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 189.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 188.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 188.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 188.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 187.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 187.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 187.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 187.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 187.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 186.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 186.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 185.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 185.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 185.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 185.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 184.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 184.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 184.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 183.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 183.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 182.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 181.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 181.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 180.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 180.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 180.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 180.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 180.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 179.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 179.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 179.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 178.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 178.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 178.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 178.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 177.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 177.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 176.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 176.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 175.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 174.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 174.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 174.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 173.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 172.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 171.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 171.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 171.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 171.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 171.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 170.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 170.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 169.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 169.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 168.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 167.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 167.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 167.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 166.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 165.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 165.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 164.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 164.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 164.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 164.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 162.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 162.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 161.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 161.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 160.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 159.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 158.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 158.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 158.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 157.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 157.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 157.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 155.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 154.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 154.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 154.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 153.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 152.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 152.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 152.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 149.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 149.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 149.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 148.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 148.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 148.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 147.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 147.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 147.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 145.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 142.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 142.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 142.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 141.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 141.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 140.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 140.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 140.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 139.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 139.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 138.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 138.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 133.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 133.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 132.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 132.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 132.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 131.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 131.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 129.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 128.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 127.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 127.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 126.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 125.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 116.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 114.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 113.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 105.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 93.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 86.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 79.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 221.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 221.9
FF:10164-103B2 76 years, female 221.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 44.4
Pig sample Sample description nTPM
Caudate
nTPM: 44.4
Samples: 4

Max nTPM: 49.5
Min nTPM: 39.1
Sample A Female 46.8
Sample B Female 42.1
Sample C Male 49.5
Sample D Male 39.1

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