HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.5 nTPM
HPA:14.5 nTPM
GTEx:37.9 nTPM
FANTOM5:68.4 Scaled Tags Per Million
Pig:27.8 nTPM
Mouse:49.6 nTPM
Allen mouse:19.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024652
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.5
Sample id Sample description nTPM
Hippocampus
nTPM: 14.4
1898 Male, age 80, left hemisphere 16.3
2148 Female, age 91, left hemisphere 15.6
2621 Female, age 67, right hemisphere 15.5
2529 Female, age 94, left hemisphere 13.8
1855 Male, age 76, left hemisphere 12.7
1911 Female, age 85, right hemisphere 12.5
Dentate gyrus
nTPM: 13.0
2531 Female, age 67, both hemispheres 14.1
2010 Male, age 76, both hemispheres 13.5
1927 Female, age 91, both hemispheres 12.9
2246 Female, age 85, both hemispheres 12.9
2530 Female, age 94, left hemisphere 12.3
2528 Male, age 74, both hemispheres 12.1
Entorhinal gyrus
nTPM: 14.5
2686 Male, age 75, right hemisphere 16.5
2764 Male, age 80, right hemisphere 14.5
2117 Female, age 91, right hemisphere 14.3
1938 Female, age 85, left hemisphere 14.1
2613 Female, age 94, left hemisphere 13.9
1787 Male, age 76, left hemisphere 13.8
Hippocampus, CA1
nTPM: 13.8
2749 Male, age 80, left hemisphere 15.0
2527 Male, age 74, both hemispheres 14.5
1873 Female, age 85, both hemispheres 13.7
2082 Female, age 91, right hemisphere 13.3
2045 Male, age 76, both hemispheres 12.3
Hippocampus, CA2
nTPM: 14.1
1963 Male, age 80, left hemisphere 17.5
1892 Male, age 76, both hemispheres 15.1
2113 Female, age 91, right hemisphere 13.9
1940 Female, age 85, left hemisphere 13.6
2249 Male, age 74, both hemispheres 12.4
2437 Female, age 94, left hemisphere 12.0
Hippocampus, CA3
nTPM: 13.5
1867 Male, age 76, both hemispheres 14.8
2620 Female, age 94, left hemisphere 14.5
1891 Female, age 85, both hemispheres 13.3
2861 Female, age 67, both hemispheres 13.1
2137 Male, age 80, left hemisphere 12.8
2436 Male, age 74, both hemispheres 12.6
Parahippocampal cortex
nTPM: 14.3
2692 Male, age 74, both hemispheres 17.2
1850 Male, age 80, both hemispheres 15.3
2622 Female, age 67, right hemisphere 14.9
1990 Female, age 91, right hemisphere 14.7
2693 Female, age 94, both hemispheres 14.1
2250 Female, age 67, right hemisphere 13.9
2532 Female, age 72, left hemisphere 13.5
1933 Female, age 85, both hemispheres 13.3
2245 Female, age 91, both hemispheres 13.1
2018 Male, age 76, both hemispheres 12.7
Perirhinal gyrus
nTPM: 14.1
1794 Male, age 80, right hemisphere 14.8
2521 Female, age 94, right hemisphere 14.5
1847 Female, age 91, left hemisphere 14.3
1841 Female, age 85, right hemisphere 14.2
2848 Male, age 76, right hemisphere 12.8
Subiculum
nTPM: 14.3
1901 Male, age 80, both hemispheres 15.5
2619 Male, age 74, both hemispheres 15.0
1977 Female, age 85, both hemispheres 14.3
2042 Male, age 76, both hemispheres 13.9
2438 Female, age 94, left hemisphere 13.6
2729 Female, age 91, right hemisphere 13.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.9
Samples: 197

Max nTPM: 61.4
Min nTPM: 25.3
Std nTPM: 6.6
Median nTPM: 37.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 61.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 58.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 53.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 53.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 53.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 52.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 52.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 50.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 50.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 50.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 49.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.4
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 62.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.8
Samples: 4

Max nTPM: 29.5
Min nTPM: 26.1
Sample A Female 29.5
Sample B Female 26.2
Sample C Male 29.5
Sample D Male 26.1
Entorhinal cortex
nTPM: 27.2
Samples: 4

Max nTPM: 31.5
Min nTPM: 23.6
Sample A Female 28.2
Sample B Female 31.5
Sample C Male 23.6
Sample D Male 25.4
Subiculum
nTPM: 25.7
Samples: 4

Max nTPM: 30.5
Min nTPM: 23.8
Sample A Female 30.5
Sample B Female 24.7
Sample C Male 23.8
Sample D Male 23.9
Ventral hippocampus
nTPM: 26.4
Samples: 4

Max nTPM: 29.4
Min nTPM: 22.9
Sample A Female 24.6
Sample B Female 22.9
Sample C Male 28.5
Sample D Male 29.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.9
Samples: 4

Max nTPM: 46.9
Min nTPM: 43.8
Sample A Male 43.8
Sample B Male 44.5
Sample C Female 46.9
Sample D Female 44.5
Hippocampal formation
nTPM: 49.7
Samples: 4

Max nTPM: 51.9
Min nTPM: 46.3
Sample A Male 49.8
Sample B Male 50.6
Sample C Female 51.9
Sample D Female 46.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.4
67881765 Antisense, RP_040920_02_G03, Mouse strain C57BL/6J (56 days, male) 19.4

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