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SLC25A3
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  • SLC25A3
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:150.4 nTPM
HPA:150.4 nTPM
GTEx:152.8 nTPM
FANTOM5:175.0 Scaled Tags Per Million
Pig:148.9 nTPM

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 150.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 137.7
1981 Female, age 72, midline 159.0
2565 Male, age 75, midline 150.1
2194 Female, age 79, both hemispheres 135.6
2048 Male, age 55, midline 123.9
2816 Male, age 47, midline 120.0
Cervical spinal cord, dorsal horn
nTPM: 132.6
2173 Female, age 72, unknown 164.9
2069 Male, age 47, both hemispheres 148.7
2297 Male, age 75, both hemispheres 128.9
2296 Male, age 66, both hemispheres 122.9
1877 Male, age 55, unknown 119.4
2721 Male, age 90, both hemispheres 110.7
Cervical spinal cord, ventral horn
nTPM: 150.4
2480 Male, age 75, both hemispheres 176.9
2809 Male, age 90, both hemispheres 169.3
2068 Male, age 55, unknown 147.5
2098 Female, age 72, unknown 147.5
2295 Male, age 66, both hemispheres 135.4
2820 Female, age 79, both hemispheres 126.3

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 152.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 152.8
Samples: 159

Max nTPM: 237.0
Min nTPM: 96.9
Std nTPM: 24.3
Median nTPM: 151.0
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 237.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 226.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 208.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 208.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 208.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 207.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 204.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 197.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 196.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 195.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 195.1
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 192.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 191.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 190.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 189.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 189.3
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 187.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 185.5
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 185.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 182.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 181.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 179.2
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 178.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 177.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 177.8
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 176.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 176.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 175.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 175.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 173.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 173.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 172.4
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 172.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 171.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 169.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 169.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 167.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 167.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 167.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 165.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 164.5
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 164.1
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 163.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 162.8
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 162.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 162.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 162.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 161.2
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 161.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 160.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 160.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 160.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 159.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 159.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 158.5
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 158.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 158.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 158.3
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 158.3
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 157.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 157.3
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 156.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 156.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 156.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 155.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 155.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 155.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 154.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 154.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 153.7
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 153.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 153.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 153.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 153.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 152.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 151.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 151.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 151.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 151.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 151.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 150.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 148.4
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 148.2
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 148.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 147.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 146.4
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 145.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 145.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 145.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 144.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 144.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 144.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 142.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 142.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 142.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 142.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 141.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 140.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 140.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 140.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 140.0
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 140.0
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 139.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 139.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 139.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 139.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 138.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 137.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 137.5
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 137.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 137.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 137.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 136.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 135.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 135.2
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 135.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 135.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 135.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 134.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 134.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 134.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 134.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 134.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 133.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 133.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 133.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 133.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 132.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 132.7
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 132.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 131.9
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 131.6
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 131.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 130.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 130.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 130.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 129.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 129.8
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 129.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 128.9
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 128.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 128.6
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 127.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 126.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 126.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 125.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 125.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 124.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 124.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 123.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 120.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 118.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 117.3
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 116.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 116.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 114.8
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 105.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 103.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 96.9
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 175.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 175.0
FF:10181-103D1 60 years, female 198.8
FF:10159-103A6 76 years, female 151.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 148.9
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 140.1
Samples: 4

Max nTPM: 149.8
Min nTPM: 123.9
Sample A Female 149.8
Sample B Female 123.9
Sample C Male 148.9
Sample D Male 137.9
Ventral spinal cord
nTPM: 148.9
Samples: 4

Max nTPM: 165.1
Min nTPM: 127.2
Sample A Female 143.6
Sample B Female 165.1
Sample C Male 159.7
Sample D Male 127.2

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