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SLC25A3
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TISSUE SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:321.2 nTPM
HPA:305.1 nTPM
GTEx:321.2 nTPM
FANTOM5:696.8 Scaled Tags Per Million

SMALL INTESTINE - Annotated protein expression
Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 305.1
overview
Male, age 65
Small intestine sample 232
nTPM: 328.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 306.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 256.1
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 328.6

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 321.2
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 321.2
Samples: 187

Max nTPM: 723.7
Min nTPM: 149.3
Std nTPM: 105.4
Median nTPM: 309.5
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 723.7
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 600.0
GTEX-111YS-1426-SM-5GID8 60-69 years, male 590.1
GTEX-YFCO-1326-SM-664NV 40-49 years, male 574.4
GTEX-1122O-1326-SM-5H11F 60-69 years, female 573.0
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 558.7
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 534.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 530.5
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 518.3
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 511.6
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 509.7
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 508.1
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 501.4
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 496.1
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 494.9
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 492.7
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 486.5
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 485.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 466.3
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 462.8
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 460.5
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 457.6
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 452.9
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 449.3
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 444.6
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 444.5
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 444.2
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 443.4
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 442.1
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 434.9
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 431.4
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 428.6
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 424.7
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 424.4
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 422.5
GTEX-14PKU-1626-SM-6871C 40-49 years, female 408.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 404.9
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 397.0
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 395.0
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 394.5
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 390.8
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 388.7
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 382.2
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 380.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 380.4
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 377.6
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 375.1
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 372.9
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 371.8
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 367.9
GTEX-117YX-0326-SM-5GICL 50-59 years, male 367.5
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 367.3
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 367.3
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 366.8
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 365.7
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 364.6
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 364.5
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 363.8
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 363.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 362.3
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 360.4
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 357.6
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 356.2
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 354.6
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 351.7
GTEX-ZTSS-0926-SM-59865 40-49 years, male 350.6
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 350.1
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 348.6
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 348.3
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 345.6
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 342.5
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 338.8
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 334.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 333.0
GTEX-13113-1226-SM-5EGHT 60-69 years, female 332.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 332.3
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 331.1
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 330.8
GTEX-144GM-1026-SM-79OKU 20-29 years, male 326.6
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 326.2
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 326.1
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 325.9
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 324.7
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 321.4
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 321.1
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 320.8
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 320.1
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 319.3
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 314.8
GTEX-14PN3-2026-SM-68729 60-69 years, female 313.4
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 312.9
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 312.6
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 309.5
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 309.5
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 308.0
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 307.1
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 306.6
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 305.5
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 304.1
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 303.6
GTEX-1192X-2526-SM-59868 50-59 years, male 303.5
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 302.8
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 300.6
GTEX-14PK6-1626-SM-6871I 70-79 years, female 299.6
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 299.4
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 298.5
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 293.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 290.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 287.1
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 284.7
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 281.9
GTEX-1C475-1426-SM-793CH 40-49 years, female 280.7
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 279.7
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 279.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 278.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 275.1
GTEX-13111-1426-SM-5DUW3 50-59 years, male 272.0
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 269.2
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 266.5
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 265.4
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 263.2
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 262.1
GTEX-13O61-1326-SM-5KM31 60-69 years, male 261.9
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 258.9
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 258.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 257.9
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 257.4
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 257.2
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 256.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 255.6
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 254.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 254.8
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 254.5
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 252.8
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 247.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 245.9
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 244.8
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 242.9
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 242.3
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 239.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 238.2
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 236.9
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 236.3
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 233.4
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 231.8
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 231.0
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 230.1
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 228.8
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 226.9
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 224.8
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 222.7
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 221.1
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 219.7
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 217.7
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 217.6
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 215.8
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 214.7
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 210.6
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 207.9
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 205.4
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 204.5
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 203.2
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 203.1
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 202.9
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 202.4
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 199.6
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 198.1
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 196.8
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 195.5
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 195.2
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 193.7
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 192.8
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 189.5
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 188.6
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 188.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 187.9
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 187.6
GTEX-183FY-1626-SM-793D8 20-29 years, male 187.1
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 185.5
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 180.8
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 175.3
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 169.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 160.8
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 160.0
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 157.4
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 150.0
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 149.3
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 696.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 696.8
FF:10024-101D6 15,40,85 years, mixed 696.8

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