HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.4 nTPM
HPA:39.4 nTPM
GTEx:78.6 nTPM
FANTOM5:129.9 Scaled Tags Per Million
Pig:62.2 nTPM
Mouse:159.6 nTPM
Allen mouse:10.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005723Antibody HPA050654Antibody CAB000121Antibody CAB035991
Glial cells MediumHighMediumHigh
Neuronal cells Not detectedNot detectedNot detectedLow









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.4
Sample id Sample description nTPM
Hippocampus
nTPM: 22.2
1898 Male, age 80, left hemisphere 29.3
2621 Female, age 67, right hemisphere 27.6
2529 Female, age 94, left hemisphere 26.3
1911 Female, age 85, right hemisphere 20.5
1855 Male, age 76, left hemisphere 18.2
2148 Female, age 91, left hemisphere 11.3
Dentate gyrus
nTPM: 22.0
2530 Female, age 94, left hemisphere 46.7
2010 Male, age 76, both hemispheres 27.7
2528 Male, age 74, both hemispheres 19.1
2531 Female, age 67, both hemispheres 17.4
2246 Female, age 85, both hemispheres 14.6
1927 Female, age 91, both hemispheres 6.3
Entorhinal gyrus
nTPM: 39.4
2117 Female, age 91, right hemisphere 80.5
2613 Female, age 94, left hemisphere 48.1
2764 Male, age 80, right hemisphere 45.3
1787 Male, age 76, left hemisphere 36.6
1938 Female, age 85, left hemisphere 21.6
2686 Male, age 75, right hemisphere 4.1
Hippocampus, CA1
nTPM: 22.6
2749 Male, age 80, left hemisphere 45.5
2527 Male, age 74, both hemispheres 25.3
2082 Female, age 91, right hemisphere 19.7
2045 Male, age 76, both hemispheres 13.3
1873 Female, age 85, both hemispheres 9.2
Hippocampus, CA2
nTPM: 28.1
1963 Male, age 80, left hemisphere 37.5
1940 Female, age 85, left hemisphere 34.3
2437 Female, age 94, left hemisphere 30.5
2249 Male, age 74, both hemispheres 26.5
2113 Female, age 91, right hemisphere 24.9
1892 Male, age 76, both hemispheres 15.0
Hippocampus, CA3
nTPM: 17.5
2137 Male, age 80, left hemisphere 31.2
1867 Male, age 76, both hemispheres 28.4
1891 Female, age 85, both hemispheres 21.1
2861 Female, age 67, both hemispheres 12.0
2620 Female, age 94, left hemisphere 9.0
2436 Male, age 74, both hemispheres 3.4
Parahippocampal cortex
nTPM: 23.2
2250 Female, age 67, right hemisphere 33.4
1990 Female, age 91, right hemisphere 32.1
2018 Male, age 76, both hemispheres 31.8
2245 Female, age 91, both hemispheres 31.3
2532 Female, age 72, left hemisphere 30.9
2693 Female, age 94, both hemispheres 20.0
1933 Female, age 85, both hemispheres 18.4
2692 Male, age 74, both hemispheres 15.2
1850 Male, age 80, both hemispheres 15.0
2622 Female, age 67, right hemisphere 3.6
Perirhinal gyrus
nTPM: 24.1
2521 Female, age 94, right hemisphere 40.5
2848 Male, age 76, right hemisphere 29.3
1794 Male, age 80, right hemisphere 21.2
1847 Female, age 91, left hemisphere 18.5
1841 Female, age 85, right hemisphere 11.0
Subiculum
nTPM: 29.2
2042 Male, age 76, both hemispheres 39.8
1901 Male, age 80, both hemispheres 39.7
1977 Female, age 85, both hemispheres 33.1
2619 Male, age 74, both hemispheres 27.1
2729 Female, age 91, right hemisphere 22.6
2438 Female, age 94, left hemisphere 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 78.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.6
Samples: 197

Max nTPM: 243.0
Min nTPM: 17.7
Std nTPM: 33.8
Median nTPM: 76.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 243.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 225.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 188.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 164.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 158.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 150.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 149.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 138.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 137.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 137.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 136.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 129.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 129.9
FF:10153-102I9 76 years, female 157.3
FF:10169-103B7 60 years, female 102.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 62.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 62.2
Samples: 4

Max nTPM: 94.6
Min nTPM: 31.3
Sample A Female 94.6
Sample B Female 56.2
Sample C Male 66.6
Sample D Male 31.3
Entorhinal cortex
nTPM: 50.0
Samples: 4

Max nTPM: 54.5
Min nTPM: 44.1
Sample A Female 54.5
Sample B Female 48.8
Sample C Male 52.6
Sample D Male 44.1
Subiculum
nTPM: 39.8
Samples: 4

Max nTPM: 49.3
Min nTPM: 34.5
Sample A Female 49.3
Sample B Female 35.6
Sample C Male 34.5
Sample D Male 39.9
Ventral hippocampus
nTPM: 50.9
Samples: 4

Max nTPM: 69.2
Min nTPM: 28.1
Sample A Female 50.9
Sample B Female 28.1
Sample C Male 55.4
Sample D Male 69.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 159.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 159.6
Samples: 4

Max nTPM: 182.7
Min nTPM: 141.6
Sample A Male 151.6
Sample B Male 162.3
Sample C Female 141.6
Sample D Female 182.7
Hippocampal formation
nTPM: 124.1
Samples: 4

Max nTPM: 140.3
Min nTPM: 108.3
Sample A Male 108.3
Sample B Male 126.6
Sample C Female 121.0
Sample D Female 140.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.6
74658080 Antisense, RP_060220_04_D05, Mouse strain C57BL/6J (56 days, male) 10.7
69672593 Antisense, RP_050428_04_B04, Mouse strain C57BL/6J (56 days, male) 10.5

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The Human Protein Atlas

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