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RAB7A
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  • RAB7A
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:143.4 nTPM
GTEx:143.4 nTPM
FANTOM5:313.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA006964Antibody CAB037131
Squamous epithelial cells MediumHigh



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 143.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 143.4
Samples: 156

Max nTPM: 345.8
Min nTPM: 87.5
Std nTPM: 39.7
Median nTPM: 135.4
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 345.8
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 338.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 240.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 227.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 218.9
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 215.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 211.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 206.5
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 206.3
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 202.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 201.0
GTEX-S341-1226-SM-4AD5S 40-49 years, female 200.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 199.8
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 197.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 196.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 195.1
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 187.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 186.9
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 183.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 181.9
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 181.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 179.8
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 178.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 178.3
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 177.7
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 176.7
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 176.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 176.4
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 174.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 171.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 171.2
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 170.8
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 169.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 167.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 166.8
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 166.6
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 166.1
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 165.5
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 165.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 164.7
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 163.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 163.6
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 162.8
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 160.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 160.4
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 157.2
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 156.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 154.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 153.3
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 152.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 152.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 151.4
GTEX-QCQG-1226-SM-48U23 50-59 years, female 150.9
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 150.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 150.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 150.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 149.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 149.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 149.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 148.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 146.9
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 146.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 146.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 145.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 145.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 145.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 144.5
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 144.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 143.5
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 141.8
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 141.3
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 141.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 140.5
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 140.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 139.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 138.5
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 136.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 135.5
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 135.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 135.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 134.9
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 134.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 133.9
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 133.6
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 133.1
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 132.9
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 132.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 131.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 130.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 130.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 130.5
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 129.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 129.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 129.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 127.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 127.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 126.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 125.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 124.4
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 124.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 124.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 123.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 123.6
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 123.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 122.1
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 120.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 119.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 118.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 117.9
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 117.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 117.0
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 115.9
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 114.7
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 114.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 114.6
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 114.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 114.2
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 114.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 113.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 113.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 112.9
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 112.8
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 112.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 112.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 112.2
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 112.0
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 111.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 110.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 109.8
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 108.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 107.2
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 107.2
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 106.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 106.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 106.0
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 105.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 105.8
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 104.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 104.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 104.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 102.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 101.9
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 101.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 98.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 97.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 97.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 96.7
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 96.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 95.8
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 94.7
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 94.3
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 93.3
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 92.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 91.6
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 91.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 87.5
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 313.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 313.7
FF:10204-103F6 68 years, female 313.7

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