We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
KIFAP3
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • KIFAP3
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:34.5 nTPM
FANTOM5:124.6 Scaled Tags Per Million
Pig:84.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA023738Antibody HPA023742
Glial cells MediumMedium
Neuronal cells HighHigh



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 34.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 34.5
Samples: 246

Max nTPM: 84.4
Min nTPM: 21.0
Std nTPM: 8.3
Median nTPM: 33.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 84.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 77.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 65.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 54.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 54.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 53.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 53.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 53.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 51.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 51.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 49.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 47.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 47.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 46.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 46.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 46.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 45.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 45.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 45.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 44.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 44.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 44.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 44.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 44.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 44.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 43.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 43.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 43.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 43.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 43.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 42.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 42.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 41.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 41.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 41.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 41.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 41.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 41.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 41.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 41.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 40.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 40.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 40.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 40.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 40.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 40.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 40.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 40.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 39.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 39.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 39.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 39.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 39.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 39.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 38.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 38.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 38.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 38.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 38.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 38.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 38.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 37.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 37.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 37.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 37.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 37.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 37.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 37.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 37.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 37.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 37.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 37.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 37.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 37.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 37.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 37.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 36.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 36.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 36.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 36.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 36.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 36.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 36.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 36.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 36.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 36.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 36.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 36.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 35.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 35.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 35.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 35.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 35.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 35.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 35.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 35.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 35.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 35.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 35.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 35.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 35.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 34.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 34.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 34.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 34.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 34.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 34.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 34.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 34.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 34.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 34.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 34.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 33.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 33.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 33.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 33.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 33.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 33.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 33.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 33.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 33.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 33.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 33.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 33.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 33.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 33.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 33.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 33.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 32.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 32.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 32.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 32.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 32.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 32.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 32.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 32.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 32.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 32.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 32.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 32.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 32.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 32.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 32.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 32.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 31.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 31.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 31.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 31.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 31.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 31.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 31.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 31.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 31.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 31.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 31.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 31.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 31.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 31.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 31.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 31.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 31.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 31.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 30.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 30.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 30.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 30.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 30.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 30.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 30.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 30.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 30.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 30.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 29.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 29.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 29.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 29.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 29.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 29.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 29.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 29.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 29.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 29.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 29.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 29.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 28.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 28.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 28.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 28.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 28.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 28.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 28.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 28.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 28.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 28.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 28.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 28.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 27.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 27.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 27.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 27.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 27.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 27.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 27.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 27.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 27.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 27.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 27.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 27.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 27.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 26.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 26.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 26.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 26.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 26.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 26.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 26.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 26.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 26.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 26.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 25.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 25.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 25.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 25.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 25.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 25.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 25.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 24.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 24.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 24.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 24.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 24.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 24.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 24.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 23.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 23.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 23.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 23.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 23.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 22.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 22.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 22.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 22.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 21.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 21.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 21.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 21.0
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 124.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 124.6
FF:10164-103B2 76 years, female 124.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 84.2
Pig sample Sample description nTPM
Caudate
nTPM: 84.2
Samples: 4

Max nTPM: 92.6
Min nTPM: 78.7
Sample A Female 92.6
Sample B Female 78.7
Sample C Male 84.8
Sample D Male 80.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.