HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Mouse brain, Intensity
Hippocampal formationi 		33.701
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:76.2 nTPM
HPA:76.2 nTPM
GTEx:58.8 nTPM
FANTOM5:134.8 Scaled Tags Per Million
Pig:53.8 nTPM
Mouse:98.2 nTPM
Allen mouse:13.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001922
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA001922
Hippocampal formation mean intensity 33.701
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 17.402
Molecular layer of the dentate gyrus 9.930
Granular dentate gyrus 22.197
CA1 - oriens layer 11.297
CA1 - pyramidal layer 32.682
CA1 - radiatum layer 22.059
CA2 - oriens layer 18.071
CA2 - pyramidal layer 33.701
CA2 - radiatum layer 27.015
CA3 - oriens layer 12.786
CA3 - pyramidal layer 33.482
CA3 - radiatum layer 9.478
Stratum lucidum 17.086
Lacunosum moleculare 21.249
Subiculum -

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.2
Sample id Sample description nTPM
Hippocampus
nTPM: 33.3
2621 Female, age 67, right hemisphere 42.2
1898 Male, age 80, left hemisphere 38.8
1855 Male, age 76, left hemisphere 32.5
2148 Female, age 91, left hemisphere 30.6
1911 Female, age 85, right hemisphere 29.4
2529 Female, age 94, left hemisphere 26.2
Dentate gyrus
nTPM: 36.6
1927 Female, age 91, both hemispheres 50.1
2530 Female, age 94, left hemisphere 39.2
2246 Female, age 85, both hemispheres 38.1
2531 Female, age 67, both hemispheres 37.0
2010 Male, age 76, both hemispheres 30.0
2528 Male, age 74, both hemispheres 25.4
Entorhinal gyrus
nTPM: 76.2
2613 Female, age 94, left hemisphere 125.4
2686 Male, age 75, right hemisphere 94.3
2764 Male, age 80, right hemisphere 76.1
1938 Female, age 85, left hemisphere 68.0
1787 Male, age 76, left hemisphere 51.9
2117 Female, age 91, right hemisphere 41.8
Hippocampus, CA1
nTPM: 45.4
2749 Male, age 80, left hemisphere 62.6
2082 Female, age 91, right hemisphere 55.0
2527 Male, age 74, both hemispheres 43.7
2045 Male, age 76, both hemispheres 36.2
1873 Female, age 85, both hemispheres 29.4
Hippocampus, CA2
nTPM: 40.9
1892 Male, age 76, both hemispheres 54.2
2437 Female, age 94, left hemisphere 51.3
2113 Female, age 91, right hemisphere 36.6
1940 Female, age 85, left hemisphere 36.5
2249 Male, age 74, both hemispheres 35.3
1963 Male, age 80, left hemisphere 31.4
Hippocampus, CA3
nTPM: 43.4
2137 Male, age 80, left hemisphere 63.7
1867 Male, age 76, both hemispheres 50.9
2620 Female, age 94, left hemisphere 42.8
2861 Female, age 67, both hemispheres 41.6
2436 Male, age 74, both hemispheres 30.7
1891 Female, age 85, both hemispheres 30.3
Parahippocampal cortex
nTPM: 60.5
2622 Female, age 67, right hemisphere 83.2
2693 Female, age 94, both hemispheres 69.2
1850 Male, age 80, both hemispheres 67.8
2692 Male, age 74, both hemispheres 67.6
1990 Female, age 91, right hemisphere 63.5
2245 Female, age 91, both hemispheres 57.8
2532 Female, age 72, left hemisphere 54.0
2250 Female, age 67, right hemisphere 50.2
1933 Female, age 85, both hemispheres 49.8
2018 Male, age 76, both hemispheres 41.5
Perirhinal gyrus
nTPM: 64.9
1847 Female, age 91, left hemisphere 94.2
2521 Female, age 94, right hemisphere 76.7
1794 Male, age 80, right hemisphere 57.9
2848 Male, age 76, right hemisphere 52.1
1841 Female, age 85, right hemisphere 43.4
Subiculum
nTPM: 42.7
2438 Female, age 94, left hemisphere 59.2
1977 Female, age 85, both hemispheres 50.5
1901 Male, age 80, both hemispheres 49.4
2619 Male, age 74, both hemispheres 46.9
2042 Male, age 76, both hemispheres 29.5
2729 Female, age 91, right hemisphere 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.8
Samples: 197

Max nTPM: 147.6
Min nTPM: 4.8
Std nTPM: 25.8
Median nTPM: 56.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 147.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 136.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 120.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 112.1
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 107.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 107.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 106.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 104.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 102.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 99.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 99.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 134.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 134.8
FF:10153-102I9 76 years, female 155.6
FF:10169-103B7 60 years, female 114.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.6
Samples: 4

Max nTPM: 51.1
Min nTPM: 32.3
Sample A Female 51.1
Sample B Female 45.2
Sample C Male 45.8
Sample D Male 32.3
Entorhinal cortex
nTPM: 45.0
Samples: 4

Max nTPM: 48.2
Min nTPM: 41.8
Sample A Female 48.2
Sample B Female 41.8
Sample C Male 46.6
Sample D Male 43.3
Subiculum
nTPM: 53.8
Samples: 4

Max nTPM: 79.3
Min nTPM: 36.0
Sample A Female 79.3
Sample B Female 49.8
Sample C Male 50.0
Sample D Male 36.0
Ventral hippocampus
nTPM: 40.4
Samples: 4

Max nTPM: 52.0
Min nTPM: 29.2
Sample A Female 33.2
Sample B Female 29.2
Sample C Male 47.1
Sample D Male 52.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.2
Samples: 4

Max nTPM: 102.0
Min nTPM: 94.3
Sample A Male 100.3
Sample B Male 102.0
Sample C Female 94.3
Sample D Female 96.3
Hippocampal formation
nTPM: 94.5
Samples: 4

Max nTPM: 106.4
Min nTPM: 87.0
Sample A Male 87.0
Sample B Male 90.1
Sample C Female 94.6
Sample D Female 106.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.4
68798974 Antisense, RP_050217_01_G02, Mouse strain C57BL/6J (56 days, male) 13.4

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