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RAP1GAP
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:174.5 nTPM
FANTOM5:700.3 Scaled Tags Per Million
Pig:231.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001922
Glial cells Not detected
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 174.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 174.5
Samples: 246

Max nTPM: 367.4
Min nTPM: 19.8
Std nTPM: 79.2
Median nTPM: 183.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 367.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 358.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 333.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 330.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 326.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 310.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 309.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 304.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 302.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 300.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 299.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 297.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 297.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 287.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 287.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 286.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 283.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 283.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 283.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 281.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 281.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 280.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 272.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 271.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 270.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 268.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 268.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 267.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 266.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 266.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 265.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 263.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 263.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 258.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 258.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 257.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 256.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 256.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 254.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 254.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 253.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 252.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 252.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 251.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 251.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 251.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 249.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 249.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 248.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 246.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 246.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 246.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 246.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 245.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 245.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 244.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 244.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 243.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 243.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 242.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 242.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 240.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 239.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 239.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 239.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 237.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 236.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 234.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 233.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 231.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 230.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 230.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 228.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 228.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 227.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 226.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 224.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 223.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 223.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 223.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 222.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 222.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 219.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 219.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 219.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 218.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 215.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 215.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 214.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 214.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 214.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 214.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 212.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 211.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 211.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 209.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 208.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 207.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 206.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 205.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 204.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 204.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 204.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 202.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 201.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 200.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 199.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 198.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 196.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 196.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 195.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 194.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 194.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 193.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 192.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 192.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 192.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 191.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 191.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 188.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 186.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 185.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 183.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 183.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 182.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 178.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 176.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 175.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 171.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 170.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 169.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 167.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 167.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 165.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 165.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 165.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 164.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 163.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 162.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 162.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 161.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 161.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 158.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 158.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 157.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 156.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 153.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 151.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 149.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 148.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 147.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 146.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 143.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 143.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 143.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 141.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 140.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 140.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 137.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 137.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 135.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 133.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 132.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 132.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 131.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 129.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 129.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 129.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 129.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 128.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 126.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 125.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 123.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 122.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 121.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 119.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 118.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 118.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 117.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 116.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 116.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 114.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 114.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 114.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 113.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 111.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 109.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 104.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 102.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 100.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 99.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 98.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 98.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 97.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 95.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 93.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 92.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 92.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 89.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 83.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 82.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 80.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 80.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 79.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 78.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 78.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 77.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 76.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 75.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 74.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 73.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 71.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 71.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 70.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 68.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 67.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 67.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 67.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 65.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 65.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 64.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 63.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 62.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 62.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 61.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 59.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 58.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 58.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 54.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 54.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 53.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 52.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 50.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 49.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 46.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 44.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 43.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 40.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 36.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 36.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 24.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 24.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 23.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 22.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 19.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 700.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 700.3
FF:10164-103B2 76 years, female 700.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 231.1
Pig sample Sample description nTPM
Caudate
nTPM: 231.1
Samples: 4

Max nTPM: 282.8
Min nTPM: 153.1
Sample A Female 153.1
Sample B Female 249.0
Sample C Male 282.8
Sample D Male 239.3

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