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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 279.2
Min nTPM: 48.2
Std nTPM: 39.3
Median nTPM: 0.0
491_1
89 years, female
279.2
490_1
67 years, female
245.2
43_1
64 years, female
203.4
6_1
73 years, female
187.7
322_1
76 years, male
187.4
142_1
61 years, female
178.9
316_1
62 years, male
178.0
466_1
57 years, female
175.0
375_1
74 years, female
172.5
415_1
77 years, female
164.8
518_1
75 years, female
164.5
217_1
76 years, male
161.0
149_1
88 years, male
157.3
162_1
79 years, female
155.8
413_1
59 years, female
154.9
386_1
76 years, male
152.5
145_1
84 years, male
150.3
229_1
69 years, female
146.1
501_1
88 years, male
144.0
379_1
60 years, male
142.0
35_1
74 years, female
140.5
495_1
57 years, female
139.5
81_1
67 years, male
138.6
32_1
67 years, male
138.3
396_1
62 years, male
138.2
324_1
76 years, male
136.5
307_1
66 years, female
135.7
311_1
78 years, male
134.3
348_1
84 years, male
134.3
468_1
89 years, male
129.0
117_1
61 years, male
127.0
237_1
82 years, male
124.4
447_1
81 years, male
122.1
139_1
64 years, female
121.0
218_1
71 years, female
120.8
480_1
63 years, male
120.0
405_1
91 years, male
119.0
286_1
68 years, female
117.7
153_1
70 years, female
117.2
265_1
87 years, male
115.8
126_1
63 years, male
115.4
414_1
84 years, female
114.9
315_1
62 years, female
112.6
251_1
78 years, male
111.9
266_1
85 years, male
111.2
499_1
55 years, female
109.5
526_1
61 years, male
107.1
246_1
77 years, male
106.6
288_1
66 years, female
106.6
17_1
71 years, male
105.9
313_1
79 years, female
105.0
335_1
73 years, female
104.7
172_1
72 years, female
103.0
318_1
68 years, male
101.6
120_1
70 years, female
101.5
18_1
88 years, male
98.1
254_1
77 years, female
97.8
9_1
66 years, female
97.6
292_1
71 years, male
97.6
4_1
88 years, female
97.5
321_1
62 years, female
96.4
89_1
63 years, male
96.2
406_1
79 years, male
95.3
314_1
67 years, male
94.8
354_1
81 years, female
93.1
137_1
83 years, male
93.0
320_1
89 years, female
92.9
243_1
75 years, male
92.5
173_1
67 years, male
92.4
308_1
70 years, female
91.1
109_1
81 years, female
90.2
425_1
59 years, female
89.8
503_1
68 years, male
88.8
353_1
82 years, female
88.5
115_1
83 years, male
88.1
404_1
82 years, female
87.8
352_1
62 years, male
87.5
376_1
75 years, female
86.8
2_1
77 years, female
86.3
350_1
84 years, female
85.7
517_1
88 years, male
85.5
347_1
72 years, male
85.2
189_1
76 years, male
83.8
177_1
74 years, male
83.0
389_1
86 years, female
83.0
264_1
73 years, female
82.3
377_1
82 years, female
82.3
291_1
76 years, male
81.4
319_1
81 years, male
81.2
355_1
70 years, female
79.1
119_1
70 years, female
76.6
506_1
65 years, male
74.7
349_1
83 years, male
74.5
293_1
68 years, female
72.0
351_1
91 years, male
70.6
42_1
85 years, male
68.2
452_1
88 years, female
67.7
384_1
83 years, male
63.9
356_1
87 years, female
63.5
394_1
75 years, female
61.5
163_1
78 years, male
59.3
41_1
94 years, female
58.7
295_1
61 years, female
58.7
317_1
60 years, male
56.1
99_1
64 years, male
48.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
