COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:62.3 nTPM
HPA:62.3 nTPM
GTEx:61.7 nTPM
FANTOM5:218.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA040619Antibody HPA053987Antibody CAB033836
Endothelial cells MediumMediumMedium
Glandular cells HighMediumMedium
Peripheral nerve/ganglion High-Medium





COLON - HPA RNA-seqi
Average nTPM 62.3
overview
Male, age 54 		Colon sample 67
nTPM: 56.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 61.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 61.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 64.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 51
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 78.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 63.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 57.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 60.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 80.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 62.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 61
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 49.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 61.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 61.7
Samples: 373

Max nTPM: 112.6
Min nTPM: 20.7
Std nTPM: 13.3
Median nTPM: 61.2
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 112.6
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 98.5
GTEX-1S831-1726-SM-EWROJ 20-29 years, male 95.3
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 93.1
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 89.4
GTEX-1LGOU-1726-SM-D3L8P 20-29 years, female 89.0
GTEX-17KNJ-1826-SM-7LT9N 50-59 years, male 87.8
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 87.7
GTEX-1QP67-1426-SM-E8VOO 40-49 years, female 87.4
GTEX-ZF2S-1826-SM-4WKFF 50-59 years, female 87.2
GTEX-1MGNQ-2126-SM-EV7AC 40-49 years, male 87.2
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Colon - Transverse
Average nTPM: 51.0
Samples: 406

Max nTPM: 90.2
Min nTPM: 19.7
Std nTPM: 10.3
Median nTPM: 49.9
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 90.2
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 84.1
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 79.1
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 77.3
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 77.0
GTEX-1LBAC-1626-SM-CXZKV 20-29 years, male 77.0
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 76.4
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 76.3
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 76.2
GTEX-1QW4Y-1326-SM-EWRMZ 30-39 years, male 75.2
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 72.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 218.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 218.7
FF:10014-101C5 62,83,84 years, mixed 218.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.