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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:222.2 nTPM
GTEx:222.2 nTPM
FANTOM5:117.8 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA031531
Squamous epithelial cells Low



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 222.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 222.2
Samples: 156

Max nTPM: 358.3
Min nTPM: 137.5
Std nTPM: 41.8
Median nTPM: 214.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 358.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 346.1
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 331.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 317.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 309.7
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 307.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 301.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 295.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 292.9
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 291.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 290.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 286.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 285.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 282.7
GTEX-14PKU-1326-SM-6871B 40-49 years, female 277.5
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 275.5
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 274.8
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 273.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 273.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 271.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 270.0
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 269.3
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 269.0
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 267.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 266.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 265.8
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 265.4
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 264.5
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 264.2
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 263.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 262.9
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 262.8
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 261.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 259.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 258.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 258.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 255.2
GTEX-11I78-2026-SM-5987C 50-59 years, female 254.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 254.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 247.2
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 245.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 243.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 242.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 242.5
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 242.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 242.1
GTEX-1C475-0526-SM-793AC 40-49 years, female 239.6
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 239.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 237.5
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 237.4
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 236.9
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 236.3
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 235.8
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 234.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 234.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 233.9
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 232.4
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 232.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 229.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 227.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 227.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 225.2
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 225.1
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 223.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 222.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 221.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 221.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 221.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 220.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 219.5
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 218.7
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 217.7
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 217.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 215.7
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 215.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 215.3
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 215.1
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 214.6
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 214.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 213.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 213.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 213.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 213.3
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 212.2
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 212.1
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 211.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 210.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 209.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 209.9
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 209.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 209.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 207.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 207.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 207.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 207.1
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 206.9
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 206.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 205.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 204.8
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 204.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 202.1
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 201.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 201.0
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 200.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 200.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 199.6
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 198.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 198.0
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 198.0
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 197.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 197.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 197.2
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 194.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 193.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 193.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 192.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 191.8
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 191.6
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 190.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 190.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 189.0
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 188.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 187.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 187.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 186.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 186.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 185.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 184.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 183.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 183.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 182.8
GTEX-16NPV-2526-SM-6M483 50-59 years, female 182.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 182.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 181.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 181.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 178.3
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 178.2
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 177.9
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 177.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 175.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 173.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 173.2
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 172.8
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 170.9
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 169.2
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 166.6
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 164.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 158.8
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 158.6
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 158.3
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 158.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 156.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 150.1
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 148.9
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 148.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 137.5
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 117.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 117.8
FF:10204-103F6 68 years, female 117.8

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