We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
GNB1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • GNB1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:212.5 nTPM
FANTOM5:267.4 Scaled Tags Per Million
Pig:159.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA040736
Glial cells Not detected
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 212.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 212.5
Samples: 246

Max nTPM: 404.5
Min nTPM: 121.6
Std nTPM: 49.3
Median nTPM: 207.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 404.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 402.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 341.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 339.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 328.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 327.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 326.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 319.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 315.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 312.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 308.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 304.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 303.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 302.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 301.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 300.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 299.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 296.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 294.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 293.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 292.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 289.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 286.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 284.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 281.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 277.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 276.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 275.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 275.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 270.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 270.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 269.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 269.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 266.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 266.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 264.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 264.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 262.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 262.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 260.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 258.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 258.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 256.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 256.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 254.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 252.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 252.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 252.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 252.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 251.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 250.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 247.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 247.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 245.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 244.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 244.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 242.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 242.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 241.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 240.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 240.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 238.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 238.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 238.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 236.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 235.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 235.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 235.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 234.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 234.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 233.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 233.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 232.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 232.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 232.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 230.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 229.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 229.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 229.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 229.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 228.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 228.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 227.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 226.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 226.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 225.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 224.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 222.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 222.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 221.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 221.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 220.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 219.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 219.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 218.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 218.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 217.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 217.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 216.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 216.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 216.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 215.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 215.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 215.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 215.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 215.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 214.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 212.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 212.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 212.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 212.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 212.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 211.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 211.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 211.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 210.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 209.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 209.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 209.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 208.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 208.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 208.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 207.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 207.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 205.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 205.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 205.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 203.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 202.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 201.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 201.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 201.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 200.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 200.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 200.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 199.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 199.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 198.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 198.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 198.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 198.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 197.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 197.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 195.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 195.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 194.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 194.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 194.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 194.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 193.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 191.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 190.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 190.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 189.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 188.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 188.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 188.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 188.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 187.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 186.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 185.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 184.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 182.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 182.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 182.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 182.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 181.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 180.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 180.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 180.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 180.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 180.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 180.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 179.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 179.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 178.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 178.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 177.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 176.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 175.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 174.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 174.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 173.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 173.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 173.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 173.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 173.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 173.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 172.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 171.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 171.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 171.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 171.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 171.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 170.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 169.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 169.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 168.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 167.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 167.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 167.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 167.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 167.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 166.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 165.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 165.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 165.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 164.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 164.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 164.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 164.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 164.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 163.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 162.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 162.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 161.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 161.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 160.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 159.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 158.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 158.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 157.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 157.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 157.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 156.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 156.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 154.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 154.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 154.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 154.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 152.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 151.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 151.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 148.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 145.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 145.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 141.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 139.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 139.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 138.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 137.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 137.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 137.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 129.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 122.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 121.6
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 267.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 267.4
FF:10164-103B2 76 years, female 267.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 159.9
Pig sample Sample description nTPM
Caudate
nTPM: 159.9
Samples: 4

Max nTPM: 183.6
Min nTPM: 130.6
Sample A Female 130.6
Sample B Female 164.1
Sample C Male 183.6
Sample D Male 161.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.