HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:92.1 nTPM
HPA:92.1 nTPM
GTEx:85.1 nTPM
FANTOM5:61.5 Scaled Tags Per Million
Pig:21.3 nTPM
Mouse:107.2 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.1
Sample id Sample description nTPM
Hippocampus
nTPM: 85.5
2529 Female, age 94, left hemisphere 93.3
1898 Male, age 80, left hemisphere 87.6
1911 Female, age 85, right hemisphere 85.5
2621 Female, age 67, right hemisphere 84.3
1855 Male, age 76, left hemisphere 83.0
2148 Female, age 91, left hemisphere 79.1
Dentate gyrus
nTPM: 84.7
2530 Female, age 94, left hemisphere 95.9
2531 Female, age 67, both hemispheres 87.1
2528 Male, age 74, both hemispheres 84.8
1927 Female, age 91, both hemispheres 81.9
2010 Male, age 76, both hemispheres 80.9
2246 Female, age 85, both hemispheres 77.4
Entorhinal gyrus
nTPM: 79.4
2686 Male, age 75, right hemisphere 86.4
2117 Female, age 91, right hemisphere 83.7
1938 Female, age 85, left hemisphere 79.0
2764 Male, age 80, right hemisphere 76.4
1787 Male, age 76, left hemisphere 75.7
2613 Female, age 94, left hemisphere 75.2
Hippocampus, CA1
nTPM: 84.0
2527 Male, age 74, both hemispheres 89.4
2082 Female, age 91, right hemisphere 86.6
1873 Female, age 85, both hemispheres 83.0
2749 Male, age 80, left hemisphere 82.3
2045 Male, age 76, both hemispheres 78.7
Hippocampus, CA2
nTPM: 92.1
2437 Female, age 94, left hemisphere 104.9
2249 Male, age 74, both hemispheres 97.9
2113 Female, age 91, right hemisphere 92.7
1963 Male, age 80, left hemisphere 89.2
1940 Female, age 85, left hemisphere 85.3
1892 Male, age 76, both hemispheres 82.7
Hippocampus, CA3
nTPM: 84.8
2861 Female, age 67, both hemispheres 98.3
1867 Male, age 76, both hemispheres 91.2
1891 Female, age 85, both hemispheres 84.2
2436 Male, age 74, both hemispheres 83.2
2137 Male, age 80, left hemisphere 77.2
2620 Female, age 94, left hemisphere 74.4
Parahippocampal cortex
nTPM: 80.7
2250 Female, age 67, right hemisphere 83.9
2245 Female, age 91, both hemispheres 83.8
2693 Female, age 94, both hemispheres 81.9
1850 Male, age 80, both hemispheres 81.7
2018 Male, age 76, both hemispheres 81.2
2532 Female, age 72, left hemisphere 81.2
1990 Female, age 91, right hemisphere 80.0
2692 Male, age 74, both hemispheres 79.4
1933 Female, age 85, both hemispheres 78.6
2622 Female, age 67, right hemisphere 74.9
Perirhinal gyrus
nTPM: 78.0
1841 Female, age 85, right hemisphere 81.7
2521 Female, age 94, right hemisphere 78.7
1794 Male, age 80, right hemisphere 77.4
1847 Female, age 91, left hemisphere 77.4
2848 Male, age 76, right hemisphere 74.8
Subiculum
nTPM: 81.9
2438 Female, age 94, left hemisphere 91.6
1901 Male, age 80, both hemispheres 84.2
2042 Male, age 76, both hemispheres 81.3
2729 Female, age 91, right hemisphere 79.3
2619 Male, age 74, both hemispheres 77.7
1977 Female, age 85, both hemispheres 77.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 85.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 85.1
Samples: 197

Max nTPM: 332.4
Min nTPM: 13.9
Std nTPM: 50.6
Median nTPM: 71.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 332.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 302.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 254.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 237.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 223.7
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 211.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 201.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 194.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 187.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 186.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 183.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.5
FF:10153-102I9 76 years, female 62.4
FF:10169-103B7 60 years, female 60.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 16.1
Min nTPM: 13.9
Sample A Female 14.8
Sample B Female 16.1
Sample C Male 15.2
Sample D Male 13.9
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 21.9
Min nTPM: 15.0
Sample A Female 15.4
Sample B Female 18.9
Sample C Male 21.9
Sample D Male 15.0
Subiculum
nTPM: 17.7
Samples: 4

Max nTPM: 20.0
Min nTPM: 14.3
Sample A Female 20.0
Sample B Female 14.3
Sample C Male 18.3
Sample D Male 18.2
Ventral hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 26.4
Min nTPM: 13.8
Sample A Female 26.4
Sample B Female 18.8
Sample C Male 26.1
Sample D Male 13.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 107.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 107.2
Samples: 4

Max nTPM: 115.3
Min nTPM: 101.9
Sample A Male 108.0
Sample B Male 103.4
Sample C Female 115.3
Sample D Female 101.9
Hippocampal formation
nTPM: 89.7
Samples: 4

Max nTPM: 101.4
Min nTPM: 79.7
Sample A Male 101.4
Sample B Male 82.8
Sample C Female 79.7
Sample D Female 94.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
74881146 Antisense, RP_060220_01_A04, Mouse strain C57BL/6J (56 days, male) 1.6
69549248 Antisense, RP_050125_01_C03, Mouse strain C57BL/6J (56 days, male) 0.6

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