COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:30.5 nTPM
HPA:30.5 nTPM
GTEx:18.1 nTPM
FANTOM5:31.3 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 30.5
overview
Male, age 54 		Colon sample 67
nTPM: 29.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 19.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 19.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 46
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 33.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 30.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 49.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 26.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 30.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 24.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 33.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 33.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 18.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 18.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 17.4
Samples: 373

Max nTPM: 52.8
Min nTPM: 2.8
Std nTPM: 9.4
Median nTPM: 15.1
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 52.8
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 52.5
GTEX-1CB4G-2726-SM-79OO4 60-69 years, male 52.1
GTEX-16Z82-2426-SM-7KUMS 60-69 years, male 51.3
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 49.6
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 49.5
GTEX-1B8L1-1926-SM-7IGND 60-69 years, male 45.7
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 45.0
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 44.2
GTEX-15FZZ-1826-SM-6LLJP 30-39 years, female 42.6
GTEX-1HBPM-2626-SM-9WYU5 60-69 years, female 42.4
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Colon - Transverse
Average nTPM: 18.1
Samples: 406

Max nTPM: 93.0
Min nTPM: 3.4
Std nTPM: 13.3
Median nTPM: 14.2
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 93.0
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 84.6
GTEX-15DYW-2326-SM-6PAMU 60-69 years, female 77.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 73.8
GTEX-144GL-2526-SM-5TDDL 50-59 years, male 72.2
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 71.5
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 69.7
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 68.4
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 68.0
GTEX-SJXC-2226-SM-EVYAK 60-69 years, male 67.9
GTEX-1AX9I-2626-SM-73KU5 60-69 years, male 67.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 31.3
FF:10014-101C5 62,83,84 years, mixed 31.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.